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Pubmed retractions #1428

Merged
merged 23 commits into from
Dec 31, 2023
Merged

Pubmed retractions #1428

merged 23 commits into from
Dec 31, 2023

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kkaris
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@kkaris kkaris commented Dec 16, 2023

This PR adds functionality to get publication tags from Pubmed XML files and to build a resource file containing retracted PMIDs.

In the assemble corpus sub-module a new function is added that filters out evidence based on the retractions in the resource file.

@kkaris kkaris marked this pull request as ready for review December 16, 2023 03:44
@bgyori bgyori merged commit 731685b into master Dec 31, 2023
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@bgyori bgyori deleted the pubmed-retractions branch December 31, 2023 03:05
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2 participants