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som-shahlab

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  1. ehrshot-benchmark ehrshot-benchmark Public

    A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)

    Jupyter Notebook 140 9

  2. femr femr Public

    FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health records

    Python 110 13

  3. medalign medalign Public

    MedAlign is a clinician-generated dataset for instruction following with electronic medical records.

    89 9

  4. trove trove Public

    Weakly supervised medical named entity classification

    Python 70 21

  5. ehr-rwe ehr-rwe Public

    Weak supervision methods for extracting real world evidence from EHRs

    Python 33 5

  6. Clinfo.AI Clinfo.AI Public

    This is Clinfo.AI Demo Instruction

    Jupyter Notebook 28 8

Repositories

Showing 10 of 48 repositories
  • som-shahlab/meds_reader_paper_code’s past year of commit activity
    C++ 0 0 0 0 Updated Nov 9, 2024
  • femr Public

    FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health records

    som-shahlab/femr’s past year of commit activity
    Python 110 Apache-2.0 13 3 1 Updated Oct 28, 2024
  • ehrshot-benchmark Public

    A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)

    som-shahlab/ehrshot-benchmark’s past year of commit activity
    Jupyter Notebook 140 Apache-2.0 9 3 0 Updated Oct 28, 2024
  • som-shahlab/mimic_tutorial’s past year of commit activity
    Python 3 0 0 0 Updated Oct 9, 2024
  • medalign-website Public

    Landing page and website for the MedAlign project

    som-shahlab/medalign-website’s past year of commit activity
    HTML 0 MIT 2 0 2 Updated Oct 7, 2024
  • som-shahlab/meds_reader’s past year of commit activity
    C++ 13 Apache-2.0 0 0 0 Updated Aug 30, 2024
  • INSPECT_public Public

    INSPECT dataset/benchmark paper, accepted by NeurIPS 2023

    som-shahlab/INSPECT_public’s past year of commit activity
    Python 25 Apache-2.0 2 1 0 Updated Aug 27, 2024
  • Clinfo.AI Public

    This is Clinfo.AI Demo Instruction

    som-shahlab/Clinfo.AI’s past year of commit activity
    Jupyter Notebook 28 MIT 8 1 0 Updated Aug 20, 2024
  • aplusml Public

    APLUS ML = A Python Library for Usefulness Simulations of Machine Learning models

    som-shahlab/aplusml’s past year of commit activity
    Jupyter Notebook 19 Apache-2.0 3 4 0 Updated Aug 14, 2024
  • slurmtool Public

    SLURM helper

    som-shahlab/slurmtool’s past year of commit activity
    Python 1 0 0 0 Updated Aug 5, 2024

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