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Repository: ome/bio-formats-build Excluded PRs: - PR 153 dependabot[bot] 'Bump ome-mdbtools from `3696e5e` to `f069beb`' (state: None) Already up-to-date. Repository: ome/bio-formats-documentation Already up-to-date. Merged PRs: - PR 168 dgault 'Temporarily add imagej.net to link check ignore list' Repository: ome/bio-formats-examples Already up-to-date. Merged PRs: - PR 56 jburel 'add ij macro example' - PR 69 dgault 'Add macro examples from OME 2020 NGFF workshop' Repository: openmicroscopy/bioformats Excluded PRs: - PR 3634 sbesson 'FileStitcher: add reader.close() statement when setting the class list' (state: failure) - PR 3618 dgault 'Memoizer: Persist caching to sub readers' (label: breaking) - PR 3572 dependabot[bot] 'Bump xercesImpl from 2.8.1 to 2.12.0 in /components/formats-bsd' (label: exclude) - PR 3563 dgault 'CZI: Parse TimeSpan Default Units' (label: exclude) - PR 3562 dgault 'SCN: No color correction for SCN400' (label: exclude) - PR 3524 RainerHeintzmann 'Added bfopen5D.m and modified bfsave.m.' (user: RainerHeintzmann) - PR 3402 dgault 'BDV: Verify timepoints' (label: exclude) - PR 3347 melissalinkert 'Add FormatTools methods for creating well names' (label: exclude) - PR 3311 melissalinkert 'OME-TIFF: use blank planes when UUID cannot be resolved to a filename' (label: exclude) - PR 3168 dgault 'ND2 - Improve parsing of acq times' (label: exclude) - PR 3056 dgault 'PCI: Don't modify the width when binning is used' (exclude comment) - PR 3032 dgault 'MetaMorph ND - Use version number to generate fileset' (label: breaking) - PR 3009 dgault 'ND2 - Support multipoint global metadata' (label: breaking) Already up-to-date. Merged PRs: - PR 3383 melissalinkert 'InCell 1000/2000: don't trust the plane count in the "Images" element' - PR 3435 dgault 'AmiraParameters: Use warning for empty key' - PR 3537 dgault 'Flex: Merge IDR changes and add new group plate option' - PR 3652 melissalinkert 'MetaXpress/CellWorX: ignore case when checking for thumbnail paths' Repository: ome/ome-codecs Excluded PRs: - PR 11 melissalinkert 'ZLIB: use ByteArrayHandle instead of ByteVector for decompressing' (label: exclude) Already up-to-date. Merged PRs: - PR 18 melissalinkert 'Fix decompression in Base64Codec' Repository: ome/ome-common-java Already up-to-date. Repository: ome/ome-jai Already up-to-date. Repository: ome/ome-mdbtools Updating 3696e5e..f069beb Previously merged: - PR 10 gregfenton 'Use current link to MDB Tools project' Repository: ome/ome-metakit Already up-to-date. Repository: ome/ome-model Excluded PRs: - PR 129 rleigh-codelibre 'Add gradle build' (exclude comment) Already up-to-date. Merged PRs: - PR 128 rleigh-codelibre 'ome-xml: java: Don't report unhandled links prematurely' - PR 131 rleigh-codelibre 'MetadataConverter: Fix dropping of WellAnnotationRefs during conversion' - PR 133 rleigh-codelibre 'OMEXMLModelEnumHandler template: Correct type evaluation order' - PR 134 rleigh-codelibre 'OMEXMLModelEnum template: Correct exception handling' - PR 135 rleigh-codelibre 'Static analysis code remediation: xsd-fu Java templates' - PR 136 rleigh-codelibre 'Static analysis code remediation: ome-xml and specification Java sources' Repository: ome/ome-poi Already up-to-date. Repository: ome/ome-stubs Already up-to-date. Generated by BIOFORMATS-push#698 (https://merge-ci.openmicroscopy.org/jenkins/job/BIOFORMATS-push/698/)
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[submodule "ome-common-java"] | ||
path = ome-common-java | ||
url = https://github.com/ome/ome-common-java.git | ||
branch = master | ||
url = https://github.com/snoopycrimecop/ome-common-java.git | ||
branch = merge_ci | ||
[submodule "ome-model"] | ||
path = ome-model | ||
url = https://github.com/ome/ome-model.git | ||
branch = master | ||
url = https://github.com/snoopycrimecop/ome-model.git | ||
branch = merge_ci | ||
[submodule "ome-poi"] | ||
path = ome-poi | ||
url = https://github.com/ome/ome-poi.git | ||
branch = master | ||
url = https://github.com/snoopycrimecop/ome-poi.git | ||
branch = merge_ci | ||
[submodule "ome-mdbtools"] | ||
path = ome-mdbtools | ||
url = https://github.com/ome/ome-mdbtools.git | ||
branch = master | ||
url = https://github.com/snoopycrimecop/ome-mdbtools.git | ||
branch = merge_ci | ||
[submodule "ome-jai"] | ||
path = ome-jai | ||
url = https://github.com/ome/ome-jai.git | ||
branch = master | ||
url = https://github.com/snoopycrimecop/ome-jai.git | ||
branch = merge_ci | ||
[submodule "ome-codecs"] | ||
path = ome-codecs | ||
url = https://github.com/ome/ome-codecs.git | ||
branch = master | ||
url = https://github.com/snoopycrimecop/ome-codecs.git | ||
branch = merge_ci | ||
[submodule "ome-metakit"] | ||
path = ome-metakit | ||
url = https://github.com/ome/ome-metakit.git | ||
branch = master | ||
url = https://github.com/snoopycrimecop/ome-metakit.git | ||
branch = merge_ci | ||
[submodule "ome-stubs"] | ||
path = ome-stubs | ||
url = https://github.com/ome/ome-stubs.git | ||
branch = master | ||
url = https://github.com/snoopycrimecop/ome-stubs.git | ||
branch = merge_ci | ||
[submodule "bioformats"] | ||
path = bioformats | ||
url = https://github.com/openmicroscopy/bioformats.git | ||
branch = develop | ||
url = https://github.com/snoopycrimecop/bioformats.git | ||
branch = merge_ci | ||
[submodule "bio-formats-documentation"] | ||
path = bio-formats-documentation | ||
url = https://github.com/ome/bio-formats-documentation.git | ||
branch = master | ||
url = https://github.com/snoopycrimecop/bio-formats-documentation.git | ||
branch = merge_ci | ||
[submodule "bio-formats-examples"] | ||
path = bio-formats-examples | ||
url = https://github.com/ome/bio-formats-examples.git | ||
branch = master | ||
url = https://github.com/snoopycrimecop/bio-formats-examples.git | ||
branch = merge_ci |
Submodule bio-formats-examples
updated
5 files
Submodule bioformats
updated
4 files
Submodule ome-codecs
updated
2 files
+2 −7 | src/main/java/ome/codecs/Base64Codec.java | |
+73 −0 | src/test/java/ome/codecs/Base64CodecTest.java |
Submodule ome-model
updated
37 files