chore(main): release 1.1.0 (#63)

Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>

CHANGELOG.md

@@ -1,5 +1,32 @@
 # Changelog
 
+## [1.1.0](https://github.com/snakemake-workflows/transcriptome-differential-expression/compare/v1.0.0...v1.1.0) (2024-08-16)
+
+
+### Features
+
+* added new config files for cluster specific configurations ([#48](https://github.com/snakemake-workflows/transcriptome-differential-expression/issues/48)) ([966e059](https://github.com/snakemake-workflows/transcriptome-differential-expression/commit/966e059f3c222c012b3c88b659aa03ac0fee650b))
+* added wrappers ([#46](https://github.com/snakemake-workflows/transcriptome-differential-expression/issues/46)) ([9c3bfe4](https://github.com/snakemake-workflows/transcriptome-differential-expression/commit/9c3bfe49cde7118d841f95fcc65b36246e68d2c1))
+* env update ([#45](https://github.com/snakemake-workflows/transcriptome-differential-expression/issues/45)) ([030e041](https://github.com/snakemake-workflows/transcriptome-differential-expression/commit/030e0411a261efad2178680997cf1b2e3de7e4d7))
+* map qc ([#38](https://github.com/snakemake-workflows/transcriptome-differential-expression/issues/38)) ([4d5b8bc](https://github.com/snakemake-workflows/transcriptome-differential-expression/commit/4d5b8bcdd4fc98fc3c064f7f6d619cdf54b48e9c))
+* qc rules ([#16](https://github.com/snakemake-workflows/transcriptome-differential-expression/issues/16)) ([3237e2c](https://github.com/snakemake-workflows/transcriptome-differential-expression/commit/3237e2c4e539d65bc49155ff18b27a4dc1df820a))
+* read length filter ([#44](https://github.com/snakemake-workflows/transcriptome-differential-expression/issues/44)) ([10a8d93](https://github.com/snakemake-workflows/transcriptome-differential-expression/commit/10a8d93a21382ab4c8282e52d5a2539c06c394da))
+* Rules moved from snakefile to corresponding SMK files in rule folder. ([#54](https://github.com/snakemake-workflows/transcriptome-differential-expression/issues/54)) ([ee3dfc1](https://github.com/snakemake-workflows/transcriptome-differential-expression/commit/ee3dfc17369a1c43d46ce38354b54178d1bddc3e))
+
+
+### Bug Fixes
+
+* added import sys for log ([#36](https://github.com/snakemake-workflows/transcriptome-differential-expression/issues/36)) ([0f8ac63](https://github.com/snakemake-workflows/transcriptome-differential-expression/commit/0f8ac63654ee6abb522d8590ae02f190be790c96))
+* added new samples to config ([#39](https://github.com/snakemake-workflows/transcriptome-differential-expression/issues/39)) ([b993b01](https://github.com/snakemake-workflows/transcriptome-differential-expression/commit/b993b0168a63eed1ddbaf64f3aaf0e6d6b1061db))
+* deployment ([#64](https://github.com/snakemake-workflows/transcriptome-differential-expression/issues/64)) ([5b137c3](https://github.com/snakemake-workflows/transcriptome-differential-expression/commit/5b137c3e314b91891bb97aad8a4a3816c0fce3c8))
+* env update ([#42](https://github.com/snakemake-workflows/transcriptome-differential-expression/issues/42)) ([704b25c](https://github.com/snakemake-workflows/transcriptome-differential-expression/commit/704b25cb8a83a43d72b7ffe0775ab7081295720a))
+* fixed read filter.py for read_length=0 ([#50](https://github.com/snakemake-workflows/transcriptome-differential-expression/issues/50)) ([992346b](https://github.com/snakemake-workflows/transcriptome-differential-expression/commit/992346b24f01d077546c2ac7503b6d359d365326))
+* linting for github actions ([#56](https://github.com/snakemake-workflows/transcriptome-differential-expression/issues/56)) ([54605ae](https://github.com/snakemake-workflows/transcriptome-differential-expression/commit/54605aef94ec781545e9783f905ddf81a525bc5d))
+* lookup [#18](https://github.com/snakemake-workflows/transcriptome-differential-expression/issues/18) ([#19](https://github.com/snakemake-workflows/transcriptome-differential-expression/issues/19)) ([ed226a3](https://github.com/snakemake-workflows/transcriptome-differential-expression/commit/ed226a3adc502694cc3ef9c30f3d2d5dae431935))
+* pydeseq2 ([#52](https://github.com/snakemake-workflows/transcriptome-differential-expression/issues/52)) ([f8d566a](https://github.com/snakemake-workflows/transcriptome-differential-expression/commit/f8d566a39a5253bcb9a710bac5abd790e62a7b8d))
+* read quantification  ([#22](https://github.com/snakemake-workflows/transcriptome-differential-expression/issues/22)) ([71422a1](https://github.com/snakemake-workflows/transcriptome-differential-expression/commit/71422a13319f0893e2494f432b0170bb116c08be))
+* write de params ([#62](https://github.com/snakemake-workflows/transcriptome-differential-expression/issues/62)) ([b4fb2be](https://github.com/snakemake-workflows/transcriptome-differential-expression/commit/b4fb2beff8ebc8646008d43a363771ed21a392a1))
+
 ## 1.0.0 (2024-04-30)