Preparatory work for hierarchical clustering

src/algorithm/neighbour/fastpair.rs

@@ -173,6 +173,21 @@ impl<'a, T: RealNumber + FloatNumber, M: Array2<T>> FastPair<'a, T, M> {
         }
     }
 
+    ///
+    /// Return order dissimilarities from closest to furthest
+    ///
+    #[allow(dead_code)]
+    pub fn ordered_pairs(&self) -> std::vec::IntoIter<&PairwiseDistance<T>> {
+        // improvement: implement this to return `impl Iterator<Item = &PairwiseDistance<T>>`
+        // need to implement trait `Iterator` for `Vec<&PairwiseDistance<T>>`
+        let mut distances = self
+            .distances
+            .values()
+            .collect::<Vec<&PairwiseDistance<T>>>();
+        distances.sort_by(|a, b| a.partial_cmp(b).unwrap());
+        distances.into_iter()
+    }
+
     //
     // Compute distances from input to all other points in data-structure.
     // input is the row index of the sample matrix
@@ -588,4 +603,103 @@ mod tests_fastpair {
 
         assert_eq!(closest, min_dissimilarity);
     }
+
+    #[test]
+    fn fastpair_ordered_pairs() {
+        let x = DenseMatrix::<f64>::from_2d_array(&[
+            &[5.1, 3.5, 1.4, 0.2],
+            &[4.9, 3.0, 1.4, 0.2],
+            &[4.7, 3.2, 1.3, 0.2],
+            &[4.6, 3.1, 1.5, 0.2],
+            &[5.0, 3.6, 1.4, 0.2],
+            &[5.4, 3.9, 1.7, 0.4],
+            &[4.9, 3.1, 1.5, 0.1],
+            &[7.0, 3.2, 4.7, 1.4],
+            &[6.4, 3.2, 4.5, 1.5],
+            &[6.9, 3.1, 4.9, 1.5],
+            &[5.5, 2.3, 4.0, 1.3],
+            &[6.5, 2.8, 4.6, 1.5],
+            &[4.6, 3.4, 1.4, 0.3],
+            &[5.0, 3.4, 1.5, 0.2],
+            &[4.4, 2.9, 1.4, 0.2],
+        ])
+        .unwrap();
+        let fastpair = FastPair::new(&x).unwrap();
+
+        let ordered = fastpair.ordered_pairs();
+
+        let mut previous: f64 = -1.0;
+        for p in ordered {
+            if previous == -1.0 {
+                previous = p.distance.unwrap();
+            } else {
+                let current = p.distance.unwrap();
+                assert!(current >= previous);
+                previous = current;
+            }
+        }
+    }
+
+    #[test]
+    fn test_empty_set() {
+        let empty_matrix = DenseMatrix::<f64>::zeros(0, 0);
+        let result = FastPair::new(&empty_matrix);
+        assert!(result.is_err());
+        if let Err(e) = result {
+            assert_eq!(
+                e,
+                Failed::because(FailedError::FindFailed, "min number of rows should be 3")
+            );
+        }
+    }
+
+    #[test]
+    fn test_single_point() {
+        let single_point = DenseMatrix::from_2d_array(&[&[1.0, 2.0, 3.0]]).unwrap();
+        let result = FastPair::new(&single_point);
+        assert!(result.is_err());
+        if let Err(e) = result {
+            assert_eq!(
+                e,
+                Failed::because(FailedError::FindFailed, "min number of rows should be 3")
+            );
+        }
+    }
+
+    #[test]
+    fn test_two_points() {
+        let two_points = DenseMatrix::from_2d_array(&[&[1.0, 2.0], &[3.0, 4.0]]).unwrap();
+        let result = FastPair::new(&two_points);
+        assert!(result.is_err());
+        if let Err(e) = result {
+            assert_eq!(
+                e,
+                Failed::because(FailedError::FindFailed, "min number of rows should be 3")
+            );
+        }
+    }
+
+    #[test]
+    fn test_three_identical_points() {
+        let identical_points =
+            DenseMatrix::from_2d_array(&[&[1.0, 1.0], &[1.0, 1.0], &[1.0, 1.0]]).unwrap();
+        let result = FastPair::new(&identical_points);
+        assert!(result.is_ok());
+        let fastpair = result.unwrap();
+        let closest_pair = fastpair.closest_pair();
+        assert_eq!(closest_pair.distance, Some(0.0));
+    }
+
+    #[test]
+    fn test_result_unwrapping() {
+        let valid_matrix =
+            DenseMatrix::from_2d_array(&[&[1.0, 2.0], &[3.0, 4.0], &[5.0, 6.0], &[7.0, 8.0]])
+                .unwrap();
+
+        let result = FastPair::new(&valid_matrix);
+        assert!(result.is_ok());
+
+        // This should not panic
+        let _fastpair = result.unwrap();
+    }
 }