update README/CHANGELOG

README.md

@@ -28,6 +28,10 @@ PCGR originates from the [Norwegian Cancer Genomics Consortium (NCGC)](https://c
 
 ### Top News
 
+- *October 11th 2024:* **2.1.1 release**
+  - patch to fix [bug](https://github.com/sigven/pcgr/issues/252) with parsing of relative CDS start positions
+  - [CHANGELOG](https://sigven.github.io/pcgr/articles/CHANGELOG.html)
+
 - *September 29th 2024*: **2.1.0 release**
   - updated bundle, more oncogenic variants, CNA visualization, 
     improved RNA-seq support, bug fixes, and more

pcgrr/pkgdown/index.md

@@ -29,6 +29,10 @@ PCGR originates from the [Norwegian Cancer Genomics Consortium (NCGC)](https://c
 
 ### Top News
 
+- *October 11th 2024:* **2.1.1 release**
+  - patch to fix [bug](https://github.com/sigven/pcgr/issues/252) with parsing of relative CDS start positions
+  - [CHANGELOG](https://sigven.github.io/pcgr/articles/CHANGELOG.html)
+
 - *September 29th 2024*: **2.1.0 release**
   - updated bundle, more oncogenic variants, CNA visualization, 
     improved RNA-seq support, bug fixes, and more

pcgrr/vignettes/CHANGELOG.Rmd

@@ -21,7 +21,7 @@ diff <- function(new, old) {
 
 pr_or_issue <- function(n, type) {
   assert_that(is.numeric(n), n > 0, type %in% c("issue", "pr"))
-  type2 <- dplyr::if_else(type == "pr", "pull", "issue")
+  type2 <- dplyr::if_else(type == "pr", "pull", "issues")
   a(
     href = glue("https://github.com/sigven/pcgr/{type2}/{n}"),
     glue("{type}{n}")
@@ -46,6 +46,13 @@ sigven <- user("sigven")
 pdiakumis <- user("pdiakumis")
 ```
 
+## v2.1.1
+
+- Date: **2024-10-11**
+
+- Fix bug in parsing of relative CDS position (`r issue(252)`)
+- Move some code in the qmd templates to `pcgrr` functions
+
 ## v2.1.0
 
 - Date: **2024-09-27**