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Added MacOS-specific workflows 🔨
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* A gcc specific compiler
* A clang specific compiler
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serkor1 committed Jan 6, 2025
1 parent 55e5e13 commit a4f4594
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74 changes: 74 additions & 0 deletions .github/workflows/macos-check-clang.yaml
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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [development, FIX-45-checks-on-macos]
pull_request:
branches: [development]

name: macOS-clang

permissions: read-all

jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}

name: macOS-clang

strategy:
fail-fast: false
matrix:
config:
- {os: macos-latest, r: 'release'}

env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes

steps:
- uses: actions/checkout@v4

- uses: r-lib/actions/setup-pandoc@v2

- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true

- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::rcmdcheck reticulate
needs: check

- uses: actions/setup-python@v4
with:
python-version: "3.10.x"

- name: Setup venv with {reticulate}
shell: Rscript {0}
run: |
path_to_python <- reticulate::virtualenv_create(
envname = "r-reticulate",
python = Sys.which("python"), # placed on PATH by the setup-python action
packages = c(
"numpy",
"scipy",
"torch",
"torchmetrics",
"scikit-learn",
"imblearn"
)
)
writeLines(
sprintf("RETICULATE_PYTHON=%s", path_to_python),
Sys.getenv("GITHUB_ENV")
)
- uses: r-lib/actions/check-r-package@v2
with:
upload-snapshots: true
build_args: 'c("--no-manual", "--compact-vignettes=gs+qpdf")'
93 changes: 93 additions & 0 deletions .github/workflows/macos-check-gcc.yaml
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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [development, FIX-45-checks-on-macos]
pull_request:
branches: [development]

name: macOS-gcc

permissions: read-all

jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}

name: macOS-gcc

strategy:
fail-fast: false
matrix:
config:
- {os: macos-latest, r: 'release'}

env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes

steps:
- uses: actions/checkout@v4

- uses: r-lib/actions/setup-pandoc@v2

- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true

- name: Install GCC on macOS
if: runner.os == 'macOS'
run: |
brew update
brew install gcc
- name: Set GCC as Default Compiler on macOS
if: runner.os == 'macOS'
run: |
# Identify the installed GCC version
GCC_VERSION=$(brew list gcc | grep bin/gcc- | head -n1 | sed 's#.*/gcc-##')
echo "Detected GCC version: $GCC_VERSION"
# Set CC and CXX environment variables
echo "CC=$(brew --prefix gcc)/bin/gcc-$GCC_VERSION" >> $GITHUB_ENV
echo "CXX=$(brew --prefix gcc)/bin/g++-$GCC_VERSION" >> $GITHUB_ENV
echo "$(brew --prefix gcc)/bin" >> $GITHUB_PATH
- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::rcmdcheck reticulate
needs: check

- uses: actions/setup-python@v4
with:
python-version: "3.10.x"

- name: Setup venv with {reticulate}
shell: Rscript {0}
run: |
path_to_python <- reticulate::virtualenv_create(
envname = "r-reticulate",
python = Sys.which("python"), # placed on PATH by the setup-python action
packages = c(
"numpy",
"scipy",
"torch",
"torchmetrics",
"scikit-learn",
"imblearn"
)
)
writeLines(
sprintf("RETICULATE_PYTHON=%s", path_to_python),
Sys.getenv("GITHUB_ENV")
)
- uses: r-lib/actions/check-r-package@v2
with:
upload-snapshots: true
build_args: 'c("--no-manual", "--compact-vignettes=gs+qpdf")'

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