test #2 new website

README.md

@@ -1,48 +1,3 @@
-# [Hugo Research Group Theme](https://github.com/wowchemy/starter-hugo-research-group)
+# seaflow.netflity.com
 
-[![Screenshot](preview.png)](https://hugoblox.com/hugo-themes/)
-
-The **Research Group Template** empowers your research group to easily create a beautiful website with a stunning homepage, news, academic publications, events, team profiles, and a contact form.
-
-️**Trusted by 250,000+ researchers, educators, and students.** Highly customizable via the integrated **no-code, widget-based Wowchemy page builder**, making every site truly personalized ⭐⭐⭐⭐⭐
-
-[![Get Started](https://img.shields.io/badge/-Get%20started-ff4655?style=for-the-badge)](https://hugoblox.com/hugo-themes/)
-[![Discord](https://img.shields.io/discord/722225264733716590?style=for-the-badge)](https://discord.com/channels/722225264733716590/742892432458252370/742895548159492138)  
-[![Twitter Follow](https://img.shields.io/twitter/follow/GetResearchDev?label=Follow%20on%20Twitter)](https://twitter.com/wowchemy)
-
-Easily write technical content with plain text Markdown, LaTeX math, diagrams, RMarkdown, or Jupyter, and import publications from BibTeX.
-
-[Check out the latest demo](https://research-group.netlify.app/) of what you'll get in less than 60 seconds, or [view the showcase](https://hugoblox.com/creators/).
-
-The integrated [**Wowchemy**](https://hugoblox.com) website builder and CMS makes it easy to create a beautiful website for free. Edit your site in the CMS (or your favorite editor), generate it with [Hugo](https://github.com/gohugoio/hugo), and deploy with GitHub or Netlify. Customize anything on your site with widgets, light/dark themes, and language packs.
-
-- 👉 [**Get Started**](https://hugoblox.com/hugo-themes/)
-- 📚 [View the **documentation**](https://docs.hugoblox.com/)
-- 💬 [Chat with the **Wowchemy research community**](https://discord.gg/z8wNYzb) or [**Hugo community**](https://discourse.gohugo.io)
-- ⬇️ **Automatically import citations from BibTeX** with the [Hugo Academic CLI](https://github.com/GetRD/academic-file-converter)
-- 🐦 Share your new site with the community: [@wowchemy](https://twitter.com/wowchemy) [@GeorgeCushen](https://twitter.com/GeorgeCushen) [#MadeWithWowchemy](https://twitter.com/search?q=%23MadeWithWowchemy&src=typed_query)
-- 🗳 [Take the survey and help us improve #OpenSource](https://forms.gle/NioD9VhUg7PNmdCAA)
-- 🚀 [Contribute improvements](https://github.com/HugoBlox/hugo-blox-builder/blob/main/CONTRIBUTING.md) or [suggest improvements](https://github.com/HugoBlox/hugo-blox-builder/issues)
-- ⬆️ **Updating?** View the [Update Guide](https://docs.hugoblox.com/hugo-tutorials/update/) and [Release Notes](https://github.com/HugoBlox/hugo-blox-builder/releases)
-
-## We ask you, humbly, to support this open source movement
-
-Today we ask you to defend the open source independence of the Wowchemy website builder and themes 🐧
-
-We're an open source movement that depends on your support to stay online and thriving, but 99.9% of our creators don't give; they simply look the other way.
-
-### [❤️ Click here to become a GitHub Sponsor, unlocking awesome perks such as _exclusive academic templates and widgets_](https://github.com/sponsors/gcushen)
-
-## Demo credits
-
-Please replace the demo images with your own.
-
-- [Female scientist](https://unsplash.com/photos/uVnRa6mOLOM)
-- [2 Coders](https://unsplash.com/photos/kwzWjTnDPLk)
-- [Cafe](https://unsplash.com/photos/RnDGGnMEOao)
-- Blog posts
-  - https://unsplash.com/photos/AndE50aaHn4
-  - https://unsplash.com/photos/OYzbqk2y26c
-- Avatars
-  - https://unsplash.com/photos/5yENNRbbat4
-  - https://unsplash.com/photos/WNoLnJo7tS8
+This repository holds [Netlify](https://netlify.com) site source for the [SeaFlow website](https://seaflow.netflity.com). It uses the [Academic](https://sourcethemes.com/academic) theme.

config/_default/hugo.yaml

@@ -3,7 +3,7 @@
 # Hugo Documentation: https://gohugo.io/getting-started/configuration/#all-configuration-settings
 # This file is formatted using YAML syntax - learn more at https://learnxinyminutes.com/docs/yaml/
 
-title: Wowchemy Research Group # Website name
+title: SeaFlow Research Group # Website name
 baseURL: 'https://example.com/' # Website URL
 
 ############################

config/_default/menus.yaml

@@ -4,20 +4,20 @@
 #   The weight parameter defines the order that the links will appear in.
 
 main:
-  - name: Tour
-    url: tour
+  - name: Research
+    url: research
     weight: 10
-  - name: News
-    url: post
-    weight: 20
   - name: People
     url: people
-    weight: 30
-  - name: Events
-    url: event
-    weight: 40
+    weight: 20
   - name: Publications
     url: publication
+    weight: 30
+  - name: SeaFlow
+    url: instrument
+    weight: 40  
+  - name: Software
+    url: software
     weight: 50
   - name: Contact
     url: contact

config/_default/params.yaml

@@ -45,7 +45,7 @@ header:
 
 footer:
   copyright:
-    notice: '© {year} Me. This work is licensed under {license}'
+    notice: '© {year} François Ribalet. This work is licensed under {license}'
     license:
       enable: true
       allow_derivatives: false

content/_index.md

@@ -5,76 +5,109 @@ date: 2022-10-24
 type: landing
 
 sections:
-  - block: hero
+  - block: markdown
     content:
-      title: |
-        Wowchemy
-        Research Group
-      image:
-        filename: welcome.jpg
-      text: |
-        <br>
-        
-        The **Wowchemy Research Group** has been a center of excellence for Artificial Intelligence research, teaching, and practice since its founding in 2016.
-  
-  - block: collection
+      title: Welcome to the SeaFlow Research Group
+      text: The SeaFlow Research Group is an interdisciplinary team of scientists dedicated to understanding the role of phytoplankton in a changing planet. phytoplankton are the invisible engines of our oceans, driving the biological carbon pump that helps regulate Earth's climate. As our planet faces unprecedented climate change, understanding how these microscopic photosynthetic organisms respond to and influence environmental shifts has become increasingly critical. Our research focuses on developing innovative observational technologies and advanced computational approaches to transform our understanding of how phytoplankton drive and respond to environmental changes. We are committed to open science and reproducible research, and we welcome collaboration with other researchers and organizations.
+
+  - block: slider
     content:
-      title: Latest News
-      subtitle:
-      text:
-      count: 5
-      filters:
-        author: ''
-        category: ''
-        exclude_featured: false
-        publication_type: ''
-        tag: ''
-      offset: 0
-      order: desc
-      page_type: post
+      slides:
+      - title: High-Resolution Ocean Observations
+        content: '800 billion cell measurements of phytoplankton collected across a distance equivalent to six global circumnavigations.'
+        align: left
+        background:
+          image:
+            filename: cruisetracks.jpg
+            filters:
+              brightness: 0.7
+          position: center
+          color: '#555'
+        link:
+          icon: database
+          icon_pack: fas
+          text: Download Data
+          url: https://doi.org/10.5281/zenodo.2678021
+
+      - title: Observational Technology and Computational Tools
+        content: 'Continuous Flow-Cytometer, Matrix Population Models'
+        align: left
+        background:
+          image:
+            filename: cell-laser.jpg
+            filters:
+              brightness: 0.7
+          position: center
+          color: '#555'
+        link:
+          icon: graduation-cap
+          icon_pack: fas
+          text: Open-source Software
+          url: ../software/
+
+      # - title: Interdisciplinary Team
+      #   content: 'Biological Oceanography, Statistics, Computer Science, Engineering'
+      #   align: right
+      #   background:
+      #     image:
+      #       filename: coders.jpg
+      #       filters:
+      #         brightness: 0.5
+      #     position: center
+      #     color: '#333'
+      #   link:
+      #     icon: graduation-cap
+      #     icon_pack: fas
+      #     text: Meet the Team
+      #     url: ../people/
     design:
-      view: card
-      columns: '1'
-
+      # Slide height is automatic unless you force a specific height (e.g. '400px')
+      slide_height: ''
+      is_fullscreen: true
+      # Automatically transition through slides?
+      loop: true
+      # Duration of transition between slides (in ms)
+      interval: 6000
+
   - block: markdown
     content:
-      title:
-      subtitle: ''
-      text:
-    design:
-      columns: '1'
-      background:
-        image: 
-          filename: coders.jpg
-          filters:
-            brightness: 1
-          parallax: false
-          position: center
-          size: cover
-          text_color_light: true
-      spacing:
-        padding: ['20px', '0', '20px', '0']
-      css_class: fullscreen
+      title: Latest News
+      subtitle:
+      text: Transform your phytoplankton research with SeaFlow, our innovative flow cytometer that operates continuously underway. Own a SeaFlow or rent it for your upcoming research expeditions - [contact us](mailto:[email protected]) to discuss your research needs and become a part of the SeaFlow community.
+        {{% cta cta_link="./instrument/" cta_text="Meet the Instrument →" %}}
+
 
   - block: collection
     content:
-      title: Latest Preprints
+      title: Latest Articles
       text: ""
-      count: 5
+      count: 3
       filters:
         folders:
           - publication
-        publication_type: 'article'
     design:
-      view: citation
+      view: compact
       columns: '1'
 
-  - block: markdown
-    content:
-      title:
-      subtitle:
-      text: |
-        {{% cta cta_link="./people/" cta_text="Meet the team →" %}}
-    design:
-      columns: '1'
+
+# - block: markdown
+#     content:
+#       title:
+#       subtitle: ''
+#       text:
+#     design:
+#       columns: '1'
+#       background:
+#         image: 
+#           filename: coders.jpg
+#           filters:
+#             brightness: 1
+#           parallax: false
+#           position: center
+#           size: cover
+#           text_color_light: true
+#       spacing:
+#         padding: ['20px', '0', '20px', '0']
+#       css_class: fullscreen
+
 ---

content/authors/Aakriti Vijay/_index.md

@@ -0,0 +1,48 @@
+---
+# Display name
+title: Aakriti Vijay
+
+# Is this the primary user of the site?
+superuser: false
+
+# Role/position
+role: Undergraduate student
+
+# Organizations/Affiliations
+organizations:
+- name: University of Washington
+  url: "https://www.washington.edu"
+
+# Short bio (displayed in user profile at end of posts)
+
+#interest: 
+
+# Social/Academic Networking
+# For available icons, see: https://sourcethemes.com/academic/docs/page-builder/#icons
+#   For an email link, use "fas" icon pack, "envelope" icon, and a link in the
+#   form "mailto:[email protected]" or "#contact" for contact widget.
+social:
+- icon: envelope
+  icon_pack: fas
+  link: 'mailto:[email protected]'  # For a direct email link, use "mailto:[email protected]".
+- icon: github
+  icon_pack: fab
+  link: https://github.com/aakriti-vijay
+
+
+
+# Link to a PDF of your resume/CV from the About widget.
+# To enable, copy your resume/CV to `static/files/cv.pdf` and uncomment the lines below.
+# - icon: cv
+#   icon_pack: ai
+#   link: files/cv.pdf
+
+# Enter email to display Gravatar (if Gravatar enabled in Config)
+email: "[email protected]"
+
+# Organizational groups that you belong to (for People widget)
+#   Set this to `[]` or comment out if you are not using People widget.
+user_groups:
+- Researchers
+# - Visitors
+---

content/authors/Annette Hynes/_index.md

@@ -0,0 +1,73 @@
+---
+# Display name
+title: Annette Hynes
+
+# Username (this should match the folder name)
+authors:
+- annette
+
+# Is this the primary user of the site?
+superuser: false
+
+# Role/position
+role: Research Scientist
+
+# Organizations/Affiliations
+organizations:
+- name: University of Washington
+  url: "https://www.washington.edu"
+
+# Short bio (displayed in user profile at end of posts)
+bio: I investigate picophytoplankton distribution and diversity across physical gradients using the SeaFlow underway flow cytometer.
+
+interests:
+- Phytoplankton
+- Ecology
+- Diversity
+- Mathematical Modeling
+
+education:
+  courses:
+  - course: PhD in Biological Oceanography
+    institution: Massachusetts Institute of Technology and Woods Hole Oceanographic Institution, Cambridge, MA
+    year: 2009
+  - course: BSc in Biological Sciences and Mathematics
+    institution: University of Nebraska-Lincoln, Lincoln, NE
+    year: 2001
+
+# Social/Academic Networking
+# For available icons, see: https://sourcethemes.com/academic/docs/page-builder/#icons
+#   For an email link, use "fas" icon pack, "envelope" icon, and a link in the
+#   form "mailto:[email protected]" or "#contact" for contact widget.
+social:
+- icon: envelope
+  icon_pack: fas
+  link: 'mailto:[email protected]'  # For a direct email link, use "mailto:[email protected]".
+- icon: google-scholar
+  icon_pack: ai
+  link: https://scholar.google.com/citations?user=x3wGrNcAAAAJ&hl=en&oi=ao
+- icon: orcid
+  icon_pack: fab
+  link: https://orcid.org/0000-0001-9610-5883
+# - icon: mendeley
+#   icon_pack: fab
+#   link: https://www.mendeley.com/profiles/francois-ribalet/  
+- icon: github
+  icon_pack: fab
+  link: https://github.com/ANetTow  
+
+# Link to a PDF of your resume/CV from the About widget.
+# To enable, copy your resume/CV to `static/files/cv.pdf` and uncomment the lines below.
+# - icon: cv
+#   icon_pack: ai
+#   link: files/cv.pdf
+
+# Enter email to display Gravatar (if Gravatar enabled in Config)
+email: "[email protected]"
+
+# Organizational groups that you belong to (for People widget)
+#   Set this to `[]` or comment out if you are not using People widget.
+user_groups:
+- Alumni
+# - Visitors
+---