Adds docker setup for marvin #61
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| name: Run Test Suite | |
| on: [push, pull_request] | |
| env: | |
| SAS_BASE_DIR: sas | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| group: [1, 2, 3, 4, 5] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python 3.8 | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: 3.8 | |
| cache: 'pip' | |
| cache-dependency-path: '**/setup.cfg' | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install ".[dev,web,db]" | |
| - name: Lint with flake8 | |
| run: | | |
| pip install flake8 | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
| - name: Cache Files | |
| id: cache-sas | |
| uses: actions/cache@v3 | |
| with: | |
| path: ${{ env.SAS_BASE_DIR }} | |
| key: ${{ runner.os }}-sas-${{ hashFiles('sas/**') }} | |
| restore-keys: | | |
| ${{ runner.os }}-sas- | |
| - name: Download and Check Data | |
| if: steps.cache-sas.outputs.cache-hit != 'true' | |
| run: | | |
| mkdir ${{ env.SAS_BASE_DIR }} | |
| python bin/get_test_data.py | |
| ls ${{ env.SAS_BASE_DIR }}/* | |
| find ${{ env.SAS_BASE_DIR }} -name '*' | |
| find ${{ env.SAS_BASE_DIR }} -name '*' | wc -l | |
| du -sh ${{ env.SAS_BASE_DIR }} | |
| - name: Setup SDSS-IV data netrc | |
| uses: extractions/netrc@v1 | |
| with: | |
| machine: data.sdss.org | |
| username: ${{ secrets.S4_USERNAME }} | |
| password: ${{ secrets.S4_PASSWORD }} | |
| - name: Setup SDSS-IV api netrc | |
| uses: extractions/netrc@v1 | |
| with: | |
| machine: api.sdss.org | |
| username: ${{ secrets.S4_USERNAME }} | |
| password: ${{ secrets.S4_PASSWORD }} | |
| - name: Run tests | |
| run: | | |
| pytest tests --splits 5 --group ${{ matrix.group }} --durations-path tests/.test_durations --local-only -m "not uses_web and not uses_db and not slow" | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v3 | |
| with: | |
| file: ./coverage.xml |