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Backport PR #2801: Fix tests
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flying-sheep committed Jan 16, 2024
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1 change: 1 addition & 0 deletions docs/release-notes/1.9.7.md
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- Fix {func}`scanpy.pp.highly_variable_genes` to handle the combinations of `inplace` and `subset` consistently {pr}`2757` {smaller}`E Roellin`
- Replace usage of various deprecated functionality from {mod}`anndata` and {mod}`pandas` {pr}`2678` {pr}`2779` {smaller}`P Angerer`
- Allow to use default `n_top_genes` when using {func}`scanpy.pp.highly_variable_genes` flavor `'seurat_v3'` {pr}`2782` {smaller}`P Angerer`
- Fix {func}`scanpy.read_10x_mtx`’s `gex_only=True` mode {pr}`2801` {smaller}`P Angerer`
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