Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

add CellCharter #198

Merged
merged 6 commits into from
Oct 2, 2024
Merged

add CellCharter #198

Changes from all commits
Commits
Show all changes
6 commits
Select commit Hold shift + click to select a range
4703bdb
add CellCharter
marcovarrone Aug 20, 2024
09110fb
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Aug 20, 2024
6b29659
Fix typo
marcovarrone Aug 21, 2024
817b248
Merge branch 'main' of github.com:marcovarrone/ecosystem-packages
marcovarrone Aug 21, 2024
138347e
Merge branch 'main' into main
Zethson Sep 16, 2024
44d4a03
Merge branch 'main' into main
grst Oct 2, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
21 changes: 21 additions & 0 deletions packages/CellCharter/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,21 @@
name: CellCharter
description: |
CellCharter is a framework to identify, characterize and compare spatial domains from spatial omics and multi-omics data.
project_home: https://github.com/CSOgroup/cellcharter
documentation_home: https://cellcharter.readthedocs.io/
tutorials_home: https://cellcharter.readthedocs.io/
publications:
- 10.1038/s41588-023-01588-4
install:
pypi: cellcharter
tags:
- spatial omics
- spatial clustering
- spatial domains
- gaussian mixture model
license: BSD-3-Clause
version: v0.3.1
authors:
- marcovarrone
test_command: |
pip install ".[test]" && pytest
Loading