Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

rapids-singlecell #116

Merged
merged 2 commits into from
Aug 7, 2023
Merged

rapids-singlecell #116

merged 2 commits into from
Aug 7, 2023

Conversation

Intron7
Copy link
Member

@Intron7 Intron7 commented Aug 4, 2023

Name of the tool: rapids-singlecell

Short description: rapids-singlecell is a python package for GPU accelerated single cell data anaylsis

How does the package use scverse data structures (please describe in a few sentences):
RSC uses AnnData as its datastructure and provides near dropin replacements for scanpy. It uses the plotting API of scanpy

  • The code is publicly available under an OSI-approved license
  • The package provides versioned releases
  • The package can be installed from a standard registry (e.g. PyPI, conda-forge, bioconda)
  • The package uses automated software tests and runs them via continuous integration (CI)
  • The package provides API documentation via a website or README
  • The package uses scverse datastructures where appropriate (i.e. AnnData, MuData or SpatialData and their modality-specific extensions)
  • I am the author or maintainer of the tool and agree on listing the package on the scverse website

Recommended

  • I would like this package to be announced on scverse channels (zulip, discourse, twitter) [@Intron7 github, @Severin_1991 twitter]
  • The package provides tutorials (or "vignettes") that help getting users started quickly
  • The package uses the scverse cookiecutter template.

Copy link
Contributor

@grst grst left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

LGTM, thanks!

@grst grst merged commit 15f052b into main Aug 7, 2023
2 checks passed
@grst grst deleted the rapids-singlecell branch August 7, 2023 06:46
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants