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Add palantir to the scverse (#171)
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* add Palantir

* add authors to palantir
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katosh authored May 24, 2024
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name: Palantir
description: |
Palantir is an algorithm to align cells along differentiation trajectories.
Palantir models differentiation as a stochastic process where stem cells
differentiate to terminally differentiated cells by a series of steps through
a low dimensional phenotypic manifold. Palantir effectively captures the
continuity in cell states and the stochasticity in cell fate determination.
Palantir has been designed to work with multidimensional single cell data from
diverse technologies such as Mass cytometry and single cell RNA-seq.
project_home: https://github.com/dpeerlab/Palantir
documentation_home: https://palantir.readthedocs.io
publications:
- 10.1038/s41587-019-0068-4
install:
pypi: palantir
tags:
- markov-chain
- dimensionality-reduction
- scrna-seq
- trajectory-generation
- diffusion-maps
- differentiation
- manifold-learning
- single-cell-genomics
- cell-fate-transitions
- scrna-seq-analysis
license: GPL-2.0-or-later
version: v1.3.3
authors:
- ManuSetty
- dpeerlab
- katosh
test_command: pip install -e '.' && pip install flake8 pytest coverage typing-extensions && pytest

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