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Adding the python script for manual labeling #2

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Adding the python script for manual labeling #2

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Commits on May 15, 2020

  1. first version of the script (WIP)

    lrouhier authored and lrouhier committed May 15, 2020
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  2. Modified with an option to skip existing label

    lrouhier authored and lrouhier committed May 15, 2020
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Commits on May 19, 2020

  1. scrpit that retrieve BIDS file

    lrouhier authored and lrouhier committed May 19, 2020
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Commits on May 20, 2020

  1. correction of output file name

    lrouhier authored and lrouhier committed May 20, 2020
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Commits on May 22, 2020

  1. error on list name

    @lrouhier
    lrouhier committed May 22, 2020
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  2. added output folder (if not same as input)

    @lrouhier
    lrouhier committed May 22, 2020
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  3. added something for best view

    @lrouhier
    lrouhier committed May 22, 2020
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  4. some files had more than 15 discs

    @lrouhier
    lrouhier committed May 22, 2020
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Commits on May 26, 2020

  1. Modification for task sharing. 

    This add the -path option to manual labeling which give the root of Bids path
This changes the output of get_bids_sub to remove the BIDS root path
    @lrouhier
    lrouhier committed May 26, 2020
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  2. adding sop

    @lrouhier
    lrouhier committed May 26, 2020
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  3. added image

    @lrouhier
    lrouhier committed May 26, 2020
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  4. added auto update of the list with made subject

    @lrouhier
    lrouhier committed May 26, 2020
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  5. modified sop for stoping

    @lrouhier
    lrouhier committed May 26, 2020
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  6. modification for -file argument

    @lrouhier
    lrouhier committed May 26, 2020
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  7. modification for output change

    @lrouhier
    lrouhier committed May 26, 2020
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Commits on May 27, 2020

  1. sop: minor fixes

    @charleygros
    charleygros committed May 27, 2020
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  2. modification for no condition

    @lrouhier
    lrouhier committed May 27, 2020
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  3. better looking sop (Charley comment)

    @lrouhier
    lrouhier committed May 27, 2020
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  4. get_BIDS_sub: robust to not provided arg

    @charleygros
    charleygros committed May 27, 2020
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  5. get_BIDS_sub: get only sub-*.nii.gz

    @charleygros
    charleygros committed May 27, 2020
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  6. sop.md: typo

    @charleygros
    charleygros committed May 27, 2020
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  7. Update get_BIDS_sub.py (help issue) 

    Co-authored-by: alexfoias <[email protected]>
    @lrouhier @alexfoias
    lrouhier and alexfoias authored May 27, 2020
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  8. Update manual_labeling.py (typo missing letter) 

    Co-authored-by: alexfoias <[email protected]>
    @lrouhier @alexfoias
    lrouhier and alexfoias authored May 27, 2020
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  9. added minimal resolution

    @lrouhier
    lrouhier committed May 27, 2020
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