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WIP: Hyperplane update #1034

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WIP: Hyperplane update #1034

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756c385
working version
frheault Oct 30, 2023
db64932
Cleaner
frheault Oct 31, 2023
71840d9
working distance
frheault Nov 1, 2023
e84f084
WOrking euclidian and hyperplane
frheault Nov 2, 2023
1bafe3d
Best fastest version ever
frheault Nov 7, 2023
30a99b2
ALl but cleaning
frheault Nov 7, 2023
e5bb8d4
Ready to showcase version
frheault Nov 7, 2023
c5333db
Remove last 2
frheault Nov 8, 2023
77f2d54
Robust testing, docstring and logging
frheault Nov 8, 2023
52552df
Fix scaler
frheault Nov 24, 2023
e5be60c
Remerged with old branch
frheault Sep 30, 2024
e4a373f
Fix a few mistakes, deleted a file
frheault Oct 2, 2024
1616219
TODOs
frheault Oct 8, 2024
c915ac4
Change test file
frheault Oct 18, 2024
529646a
pep8
frheault Oct 18, 2024
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2 changes: 1 addition & 1 deletion scilpy/tractanalysis/bundle_operations.py
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Original file line number Diff line number Diff line change
Expand Up @@ -60,6 +60,7 @@ def uniformize_bundle_sft(sft, axis=None, ref_bundle=None, swap=False):
old_origin = sft.origin
sft.to_vox()
sft.to_corner()

density = get_endpoints_density_map(sft, point_to_select=3)
indices = np.argwhere(density > 0)
kmeans = KMeans(n_clusters=2, random_state=0, copy_x=True,
Expand Down Expand Up @@ -342,4 +343,3 @@ def remove_outliers_qb(streamlines, threshold, nb_points=12, nb_samplings=30,
outliers_ids, inliers_ids = prune(streamlines, threshold, summary)

return outliers_ids, inliers_ids

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