Ability to resume workflow when codecov push fails #78
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Scilpy test suite | |
| on: | |
| push: | |
| branches: | |
| - master | |
| pull_request: | |
| branches: | |
| - master | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }} | |
| cancel-in-progress: true | |
| env: | |
| MPLBACKEND: agg | |
| OPENBLAS_NUM_THREADS: 1 | |
| jobs: | |
| test: | |
| runs-on: scilus-runners | |
| if: github.repository == 'scilus/scilpy' | |
| steps: | |
| # If this runs and does not fails, its because the workflow was relaunched | |
| # with no resuming and we need to delete the artifact since we | |
| # re-executed the tests. Else, if nothing to do, it'll fail the job | |
| # (silently) and the remaining workflow will continue | |
| - name: Delete tests and coverage artifact | |
| uses: geekyeggo/delete-artifact@v4 | |
| with: | |
| name: test-coverage-${{ github.run_id }} | |
| failOnError: false | |
| - name: Checkout repository for merge | |
| uses: actions/checkout@v4 | |
| - name: Fetch python version from repository | |
| id: python-selector | |
| run: echo "python-version=$(cat .python-version)" >> $GITHUB_OUTPUT | |
| - name: Set up Python for Scilpy | |
| uses: actions/[email protected] | |
| with: | |
| python-version: ${{ steps.python-selector.outputs.python-version }} | |
| cache: 'pip' | |
| - name: Install non-python dependencies | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y \ | |
| build-essential \ | |
| curl \ | |
| git \ | |
| libblas-dev \ | |
| liblapack-dev \ | |
| libfreetype6-dev | |
| - name: Install Scilpy | |
| run: | | |
| python -m pip install --upgrade pip setuptools wheel | |
| python -m pip install -e . | |
| - name: Run tests | |
| run: | | |
| export C_INCLUDE_PATH=$pythonLocation/include/python${{ steps.python-selector.outputs.python-version }}:$C_INCLUDE_PATH | |
| pytest --cov-report term-missing:skip-covered | |
| - name: Save test results and coverage | |
| uses: actions/upload-artifact@v4 | |
| id: test-coverage-results | |
| with: | |
| name: test-coverage-${{ github.run_id }} | |
| path: | | |
| .coverage | |
| .test_reports/ | |
| coverage: | |
| runs-on: scilus-runners | |
| if: github.repository == 'scilus/scilpy' | |
| needs: test | |
| steps: | |
| - name: Checkout repository for merge | |
| uses: actions/checkout@v4 | |
| - name: Download test results and coverage | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: test-coverage-${{ github.run_id }} | |
| - name: Show the content of the workspace where we upload | |
| run: | | |
| echo "what is here : $(pwd)" | |
| ls -lha . | |
| echo "what is in GITHUB_WORKSPACE : $GITHUB_WORKSPACE" | |
| ls -lha $GITHUB_WORKSPACE | |
| echo "what is in github.workspace : ${{ github.workspace }}" | |
| ls -lha ${{ github.workspace }} | |
| exit 1 | |
| - name: Upload coverage reports to Codecov | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| flags: unittests | |
| name: scilpy-unittests-${{ github.run_id }} | |
| verbose: true | |
| fail_ci_if_error: true | |
| plugin: pycoverage | |
| - name: Delete tests and coverage artifact | |
| uses: geekyeggo/delete-artifact@v4 | |
| if: success() | |
| with: | |
| name: test-coverage-${{ github.run_id }} | |
| failOnError: false |