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Update README.md
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GuillaumeTh authored Jul 22, 2021
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Expand Up @@ -37,14 +37,14 @@ Singularity/Docker
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If you are on Linux, we recommend using the Singularity to run rbx_flow pipeline.
If you have Singularity == 3.*, launch your Nextflow command with:
`-with-singularity scilus/scilus:1.1.0_rbxflow-1.0.0`
`-with-singularity scilus/scilus:1.2.0_rbxflow-1.1.0`

If you have rebuild singularity Singularity == 2.* image is available [here](http://scil.dinf.usherbrooke.ca/en/containers_list/scilus-1.1.0_rbxflow-1.0.0.img)
Launch your Nextflow command with: `-with-singularity ABSOLUTE_PATH/scilus-1.1.0_rbxflow-1.0.0.img`
If you have rebuild singularity Singularity == 2.* image is available [here](http://scil.dinf.usherbrooke.ca/en/containers_list/scilus-1.2.0_rbxflow-1.1.0.img)
Launch your Nextflow command with: `-with-singularity ABSOLUTE_PATH/scilus-1.2.0_rbxflow-1.1.0.img`

If you are on MacOS or Windows, we recommend using the Docker container to run rbx_flow pipeline.
Launch your Nextflow command with:
`-with-docker scilus/scilus:1.1.0_rbxflow-1.0.0`
`-with-docker scilus/scilus:1.2.0_rbxflow-1.1.0`

Usage
-----
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