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Reinforce development environment #46

Merged
merged 30 commits into from
Jan 11, 2024
Merged

Reinforce development environment #46

merged 30 commits into from
Jan 11, 2024

Commits on Jan 11, 2024

  1. Add logos and TOC

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  2. Add initial version of workflows ported from nf-core to do auto linti… 

    …ng and testing
    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  3. fix to nf-core commands

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  4. fix workflows

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  5. add missing files

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  6. update config

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  7. [automated] Fix linting with Prettier

    @AlexVCaron
    nf-scil-bot authored and AlexVCaron committed Jan 11, 2024
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  8. add other ignores for prettier

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  9. fix editorconfig

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  10. fix indent for editorconfig

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  11. add schema for metadata

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  12. fix

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  13. fix linting

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  14. fix linting

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  15. reinstate publishdir

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  16. fix linting

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  17. add protocol to sif images

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  18. priors is a directory, no matter what

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  19. bind /tmp to volume to prevent out-of-space

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  20. fix noddi, n4, fslbetcrop

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  21. fix diffusivity priors

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  22. fix N4

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  23. fix extractb0

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  24. remove broken test cases for now

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  25. add yaml-schema link for linting

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  26. add last requirements for linting and testing

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  27. last fixes

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  28. fic docker endpoint

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  29. fix editoconfig

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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  30. fix docker

    @AlexVCaron
    AlexVCaron committed Jan 11, 2024
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