2nd fix for tests

scilus · Jan 26, 2024 · 5a27d69 · 5a27d69
1 parent f02fefe
commit 5a27d69
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Showing 2 changed files with 4 additions and 6 deletions.
diff --git a/modules/nf-scil/registration/synthregistration/main.nf b/modules/nf-scil/registration/synthregistration/main.nf
@@ -2,9 +2,7 @@ process REGISTRATION_SYNTHREGISTRATION {
     tag "$meta.id"
     label 'process_single'
 
-    container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
-        'freesurfer/synthmorph:latest':
-        'freesurfer/synthmorph:latest' }"
+    container "freesurfer/synthmorph:latest"
 
     input:
     tuple val(meta), path(moving), path(fixed)
@@ -31,7 +29,7 @@ process REGISTRATION_SYNTHREGISTRATION {
     def extent = task.ext.extent ? "-e "  + task.ext.extent : ""
     def weight = task.ext.weight ? "-w "  + task.ext.weight : ""
 
-    //For argument definition, mri_warp_convert -h
+    //For arguments definition, mri_warp_convert -h
     def out = task.ext.out ? "--out" + task.ext.out : "--outlps"
 
     """

diff --git a/tests/modules/nf-scil/registration/synthregistration/test.yml b/tests/modules/nf-scil/registration/synthregistration/test.yml
@@ -1,6 +1,6 @@
 ## TODO nf-core: Please run the following command to build this file:
 #                nf-core modules create-test-yml /synthregistration
-- name: "registration synthregistration"
+- name: registration synthregistration test_registration_synthregistration
   command: nextflow run ./tests/modules/nf-scil/registration/synthregistration -entry test_registration_synthregistration -c ./tests/config/nextflow.config
   tags:
     - "registration"
@@ -10,4 +10,4 @@
       md5sum: e667c7caad0bc4b7ac383fd023c654fc
     - path: "output/registration/versions.yml"
       md5sum: a01fe51bc4c6a3a6226fbf77b2c7cf3b
-    
+