Reinforce development environment #17
AlexVCarontest.yml
on: pull_request
pytest-changes
3s
pre-commit
15s
Matrix: nf-core-lint
Matrix: pytest
confirm-pass
0s
Annotations
19 errors and 1 warning
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pytest (betcrop/fslbetcrop, singularity)
Process completed with exit code 1.
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pytest (betcrop/fslbetcrop, docker)
Process completed with exit code 1.
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pytest (reconst/diffusivitypriors, singularity)
Process completed with exit code 1.
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pytest (reconst/diffusivitypriors, docker)
Process completed with exit code 1.
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pytest (utils/extractb0, singularity)
Process completed with exit code 1.
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pytest (reconst/fodf, singularity)
Process completed with exit code 1.
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pytest (preproc/n4, singularity)
Process completed with exit code 1.
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pytest (preproc/n4, docker)
Process completed with exit code 1.
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pytest (tracking/localtracking, docker)
Process completed with exit code 1.
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pytest (utils/extractb0, docker)
Process completed with exit code 1.
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pytest (reconst/fodf, docker)
Process completed with exit code 1.
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pytest (tracking/localtracking, singularity)
Process completed with exit code 1.
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pytest (reconst/noddi, docker)
System.IO.IOException: No space left on device : '/home/runner/runners/2.311.0/_diag/Worker_20240109-052958-utc.log'
at System.IO.RandomAccess.WriteAtOffset(SafeFileHandle handle, ReadOnlySpan`1 buffer, Int64 fileOffset)
at System.IO.Strategies.BufferedFileStreamStrategy.FlushWrite()
at System.IO.StreamWriter.Flush(Boolean flushStream, Boolean flushEncoder)
at System.Diagnostics.TextWriterTraceListener.Flush()
at GitHub.Runner.Common.HostTraceListener.WriteHeader(String source, TraceEventType eventType, Int32 id)
at GitHub.Runner.Common.HostTraceListener.TraceEvent(TraceEventCache eventCache, String source, TraceEventType eventType, Int32 id, String message)
at System.Diagnostics.TraceSource.TraceEvent(TraceEventType eventType, Int32 id, String message)
at GitHub.Runner.Worker.Worker.RunAsync(String pipeIn, String pipeOut)
at GitHub.Runner.Worker.Program.MainAsync(IHostContext context, String[] args)
System.IO.IOException: No space left on device : '/home/runner/runners/2.311.0/_diag/Worker_20240109-052958-utc.log'
at System.IO.RandomAccess.WriteAtOffset(SafeFileHandle handle, ReadOnlySpan`1 buffer, Int64 fileOffset)
at System.IO.Strategies.BufferedFileStreamStrategy.FlushWrite()
at System.IO.StreamWriter.Flush(Boolean flushStream, Boolean flushEncoder)
at System.Diagnostics.TextWriterTraceListener.Flush()
at GitHub.Runner.Common.HostTraceListener.WriteHeader(String source, TraceEventType eventType, Int32 id)
at GitHub.Runner.Common.HostTraceListener.TraceEvent(TraceEventCache eventCache, String source, TraceEventType eventType, Int32 id, String message)
at System.Diagnostics.TraceSource.TraceEvent(TraceEventType eventType, Int32 id, String message)
at GitHub.Runner.Common.Tracing.Error(Exception exception)
at GitHub.Runner.Worker.Program.MainAsync(IHostContext context, String[] args)
Unhandled exception. System.IO.IOException: No space left on device : '/home/runner/runners/2.311.0/_diag/Worker_20240109-052958-utc.log'
at System.IO.RandomAccess.WriteAtOffset(SafeFileHandle handle, ReadOnlySpan`1 buffer, Int64 fileOffset)
at System.IO.Strategies.BufferedFileStreamStrategy.FlushWrite()
at System.IO.StreamWriter.Flush(Boolean flushStream, Boolean flushEncoder)
at System.Diagnostics.TextWriterTraceListener.Flush()
at System.Diagnostics.TraceSource.Flush()
at GitHub.Runner.Common.TraceManager.Dispose(Boolean disposing)
at GitHub.Runner.Common.TraceManager.Dispose()
at GitHub.Runner.Common.HostContext.Dispose(Boolean disposing)
at GitHub.Runner.Common.HostContext.Dispose()
at GitHub.Runner.Worker.Program.Main(String[] args)
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pytest (reconst/noddi, docker)
ENOSPC: no space left on device, write
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pytest (reconst/noddi, docker)
Process completed with exit code 1.
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pytest (reconst/noddi, singularity)
Process completed with exit code 1.
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pytest (tracking/pfttracking, singularity)
Process completed with exit code 1.
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pytest (tracking/pfttracking, docker)
Process completed with exit code 1.
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confirm-pass
Process completed with exit code 1.
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pytest (reconst/noddi, docker)
You are running out of disk space. The runner will stop working when the machine runs out of disk space. Free space left: 93 MB
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Artifacts
Produced during runtime
| Name | Size | |
|---|---|---|
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logs-docker-
Expired
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8.73 GB |
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logs-singularity-
Expired
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12.4 GB |
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