Change prints. WIP REMOVE LEFT-OVER

scil-vital · Feb 22, 2024 · 053970f · 053970f
1 parent 899454f
commit 053970f
Showing 1 changed file with 5 additions and 4 deletions.
diff --git a/dwi_ml/data/hdf5/hdf5_creation.py b/dwi_ml/data/hdf5/hdf5_creation.py
@@ -477,7 +477,7 @@ def _process_one_volume_group(self, group: str, subj_id: str,
                                             self.enforce_files_presence,
                                             folder=subj_input_dir)
                 for mask in std_masks:
-                    logging.info("    - Loading standardization mask {}"
+                    logging.info("       - Loading standardization mask {}"
                                  .format(os.path.basename(mask)))
                     sub_mask_data = nib.load(mask).get_fdata() > 0
                     if std_mask is None:
@@ -488,6 +488,7 @@ def _process_one_volume_group(self, group: str, subj_id: str,
         file_list = self.groups_config[group]['files']
         file_list = format_filelist(file_list, self.enforce_files_presence,
                                     folder=subj_input_dir)
+        print("??? file_list", file_list)
 
         # First file will define data dimension and affine
         logging.info("       - Processing file {}"
@@ -511,7 +512,7 @@ def _process_one_volume_group(self, group: str, subj_id: str,
                                              group_affine, group_res)
 
                 if std_option == 'per_file':
-                    logging.debug('      *Standardizing sub-data')
+                    logging.info('          (standardizing)')
                     data = standardize_data(data, std_mask, independent=False)
 
                 # Append file data to hdf group.
@@ -524,11 +525,11 @@ def _process_one_volume_group(self, group: str, subj_id: str,
 
         # Standardize data (per channel) (if not done 'per_file' yet).
         if std_option == 'independent':
-            logging.debug('      *Standardizing data on each feature.')
+            logging.info('       - Standardizing data on each feature.')
             group_data = standardize_data(group_data, std_mask,
                                           independent=True)
         elif std_option == 'all':
-            logging.debug('      *Standardizing data as a whole.')
+            logging.info('       - Standardizing data as a whole.')
             group_data = standardize_data(group_data, std_mask,
                                           independent=False)
         elif std_option not in ['none', 'per_file']: