Code

ENH: TractOracle-RL #35

Code

Merged

AntoineTheb merged 153 commits intomainscil-vital/TrackToLearn:mainfrom to/rewardscil-vital/TrackToLearn:to/rewardCopy head branch name to clipboardMar 27, 2024

+3,881-27,266

Commits

Commits on May 31, 2023

• ENH: Oracle reward POC

  AntoineTheb

  committed
  9a1d71b

  Copy full SHA for 9a1d71b

• FIX: FF oracle load

  AntoineTheb

  committed
  ced3786

  Copy full SHA for ced3786

Commits on Jun 1, 2023

• ENG: weighting and scripts

  AntoineTheb

  committed
  dd0ca2c

  Copy full SHA for dd0ca2c

• ENH: merge

  AntoineTheb

  committed
  c9dc63f

  Copy full SHA for c9dc63f

• ENH: reward names

  AntoineTheb

  committed
  ffb9903

  Copy full SHA for ffb9903

• Trying stuff

  AntoineTheb

  committed
  6d2c0cb

  Copy full SHA for 6d2c0cb

Commits on Jun 6, 2023

• ENH: Reward logging

  AntoineTheb

  committed
  1a58718

  Copy full SHA for 1a58718

• ENH: clip oracle reward

  AntoineTheb

  committed
  d0be67b

  Copy full SHA for d0be67b

Commits on Jun 7, 2023

• ENH: DQN

  AntoineTheb

  committed
  bb916f4

  Copy full SHA for bb916f4

• ENH: DDQN

  AntoineTheb

  committed
  9bdb482

  Copy full SHA for 9bdb482

• ENH: PER, wip

  AntoineTheb

  committed
  718da76

  Copy full SHA for 718da76

Commits on Jun 8, 2023

• ENH: DQN fixes, PER still wip

  AntoineTheb

  committed
  bf6b23e

  Copy full SHA for bf6b23e

• ENH: NoisyNets

  AntoineTheb

  committed
  6951482

  Copy full SHA for 6951482

• ENH: incr. batch size + per option

  AntoineTheb

  committed
  d3db156

  Copy full SHA for d3db156

• WIP: C-51

  AntoineTheb

  committed
  1aba3af

  Copy full SHA for 1aba3af

Commits on Jun 9, 2023

• WIP: C-51

  AntoineTheb

  committed
  bba9836

  Copy full SHA for bba9836

• ENH: C51 works, need to tweak

  AntoineTheb

  committed
  dd8a094

  Copy full SHA for dd8a094

• ENH: support fix

  AntoineTheb

  committed
  9dfc44c

  Copy full SHA for 9dfc44c

• ENH: histogram logginh

  AntoineTheb

  committed
  4cccdea

  Copy full SHA for 4cccdea

• ENH: batch size

  AntoineTheb

  committed
  fb4072c

  Copy full SHA for fb4072c

• FIX: remove prints

  AntoineTheb

  committed
  c5e7603

  Copy full SHA for c5e7603

• ENH: various

  AntoineTheb

  committed
  8085a52

  Copy full SHA for 8085a52

Commits on Jun 13, 2023

• WIP: coverage reward

  AntoineTheb

  committed
  cd7a816

  Copy full SHA for cd7a816

• ENH: coverage reward

  AntoineTheb

  committed
  bc38a68

  Copy full SHA for bc38a68

Commits on Jun 16, 2023

• ENH: oracle threshold for score

  AntoineTheb

  committed
  829b7ee

  Copy full SHA for 829b7ee

• ENH: various

  AntoineTheb

  committed
  496bb3f

  Copy full SHA for 496bb3f

• ENH: save hparam vox

  AntoineTheb

  committed
  8f5adaa

  Copy full SHA for 8f5adaa

• ENH: tractogram filename scoring

  AntoineTheb

  committed
  02a7f1e

  Copy full SHA for 02a7f1e

• ENH: PPO LSTM?

  AntoineTheb

  committed
  4c2770e

  Copy full SHA for 4c2770e

Commits on Jun 20, 2023

• ENH: various

  AntoineTheb

  committed
  f16ddad

  Copy full SHA for f16ddad

• ENH: polar actions

  AntoineTheb

  committed
  87caec1

  Copy full SHA for 87caec1

• ENH: spherical action rescale

  AntoineTheb

  committed
  8d681db

  Copy full SHA for 8d681db

• FIX: theta phi scaling

  AntoineTheb

  committed
  e5e83e3

  Copy full SHA for e5e83e3

Commits on Jun 21, 2023

• ENH: Tractometer2 validator

  AntoineTheb

  committed
  2890ad5

  Copy full SHA for 2890ad5

• ENH: various

  AntoineTheb

  committed
  09b411f

  Copy full SHA for 09b411f

• Merge

  AntoineTheb

  committed
  36e5207

  Copy full SHA for 36e5207

Commits on Jun 22, 2023

• Merge

  AntoineTheb

  committed
  fc3e164

  Copy full SHA for fc3e164

• ENH: border reward + rm last point

  AntoineTheb

  committed
  a991ab9

  Copy full SHA for a991ab9

• Merge branch 'to/reward' of github.com:scil-vital/TrackToLearn into to/reward

  AntoineTheb

  committed
  4bd23c9

  Copy full SHA for 4bd23c9

Commits on Jun 23, 2023

• ENH: better coverage reward

  AntoineTheb

  committed
  8f838f1

  Copy full SHA for 8f838f1

• ENH: coverage interpolation

  AntoineTheb

  committed
  18ce715

  Copy full SHA for 18ce715

• Merge branch 'to/reward' of github.com:scil-vital/TrackToLearn into to/reward

  AntoineTheb

  committed
  3f5e2fc

  Copy full SHA for 3f5e2fc

Commits on Jun 26, 2023

• ENH: oracle search

  AntoineTheb

  committed
  8a3f708

  Copy full SHA for 8a3f708

Commits on Jun 28, 2023

• ENH: ppo lstm

  AntoineTheb

  committed
  b94d8f2

  Copy full SHA for b94d8f2

Commits on Aug 1, 2023

• ENH: angular error

  AntoineTheb

  committed
  f20773c

  Copy full SHA for f20773c

• Merge

  AntoineTheb

  committed
  eb20cf2

  Copy full SHA for eb20cf2

• ENH: Validators

  AntoineTheb

  committed
  d8f2c20

  Copy full SHA for d8f2c20

• ENH: angular error + fix space

  AntoineTheb

  committed
  a059809

  Copy full SHA for a059809

Commits on Aug 2, 2023

• FIX: retracking vox/rasmm fix

  AntoineTheb

  committed
  5e4e3e3

  Copy full SHA for 5e4e3e3

• ENH: angular search

  AntoineTheb

  committed
  2e50db3

  Copy full SHA for 2e50db3

• ENH: various

  AntoineTheb

  committed
  dec6299

  Copy full SHA for dec6299

Commits on Aug 3, 2023

• ENH: angular search ismrm2015

  AntoineTheb

  committed
  308f3e3

  Copy full SHA for 308f3e3

Commits on Aug 4, 2023

• ENH: tractometer val fix

  AntoineTheb

  committed
  701c32c

  Copy full SHA for 701c32c

Commits on Aug 7, 2023

• FIX: reduce oracle search range

  AntoineTheb

  committed
  ade020f

  Copy full SHA for ade020f

• ENH: oracle search fc

  AntoineTheb

  committed
  90316f6

  Copy full SHA for 90316f6

Commits on Aug 9, 2023

• ENH: tentative ismrm2015 train

  AntoineTheb

  committed
  cccb214

  Copy full SHA for cccb214

Commits on Aug 11, 2023

• ENH: Bigger SAC for better performances

  AntoineTheb

  committed
  db1254f

  Copy full SHA for db1254f

Commits on Aug 12, 2023

• ENH: increase batch size

  AntoineTheb

  committed
  53fdcfa

  Copy full SHA for 53fdcfa

Commits on Aug 15, 2023

• ENH: GPU tracking

  AntoineTheb

  committed
  f0be1ef

  Copy full SHA for f0be1ef

• FIX: GPU tracking

  AntoineTheb

  committed
  403307d

  Copy full SHA for 403307d

• TEST: harvesting mask

  AntoineTheb

  committed
  2900e83

  Copy full SHA for 2900e83

• ENH: optim harvest

  AntoineTheb

  committed
  7b3fb69

  Copy full SHA for 7b3fb69

Commits on Aug 16, 2023

• Revert "ENH: Bigger SAC for better performances"

  Show description for 0e21d2b
  AntoineTheb

  committed
  0e21d2b

  Copy full SHA for 0e21d2b

• ENH: replay as tensor

  AntoineTheb

  committed
  65504f8

  Copy full SHA for 65504f8

• Revert "ENH: replay as tensor"

  Show description for 935ef7d
  AntoineTheb

  committed
  935ef7d

  Copy full SHA for 935ef7d

Commits on Aug 18, 2023

• ENH: various optim

  AntoineTheb

  committed
  ca04b35

  Copy full SHA for ca04b35

Commits on Aug 21, 2023

• ENH: Off-policy replay and batch size

  AntoineTheb

  committed
  b72b1fa

  Copy full SHA for b72b1fa

• ENH: sac auto searcher

  AntoineTheb

  committed
  c13e661

  Copy full SHA for c13e661

• ENH: sac auto searcher

  AntoineTheb

  committed
  3982ec5

  Copy full SHA for 3982ec5

• Merge branch 'to/reward' of github.com:scil-vital/TrackToLearn into to/reward

  AntoineTheb

  committed
  24c10d5

  Copy full SHA for 24c10d5

Commits on Aug 22, 2023

• ENH: optim

  AntoineTheb

  committed
  a28945a

  Copy full SHA for a28945a

Commits on Sep 8, 2023

• ENH: dense reward + sac auto

  AntoineTheb

  committed
  1eca109

  Copy full SHA for 1eca109

Commits on Sep 13, 2023

• ENH: various

  AntoineTheb

  committed
  f83a68f

  Copy full SHA for f83a68f

• ENH: critic size factor

  AntoineTheb

  committed
  4eb5f2f

  Copy full SHA for 4eb5f2f

Commits on Sep 21, 2023

• ENH: single oracle + oracle stopping

  AntoineTheb

  committed
  f36dc93

  Copy full SHA for f36dc93

Commits on Sep 22, 2023

• ENH: oracle data

  AntoineTheb

  committed
  dba5126

  Copy full SHA for dba5126

Commits on Sep 25, 2023

• ENH: add back last point +\n oracle sparse optim +\n oracle stop flag

  AntoineTheb

  committed
  613027f

  Copy full SHA for 613027f

Commits on Sep 28, 2023

• ENH: options

  AntoineTheb

  committed
  382c3ef

  Copy full SHA for 382c3ef

Commits on Oct 4, 2023

• ENH: Filters + refactoring

  AntoineTheb

  committed
  e20dbca

  Copy full SHA for e20dbca

Commits on Oct 11, 2023

• ENH: fix validation

  AntoineTheb

  committed
  870f8ff

  Copy full SHA for 870f8ff

Commits on Oct 12, 2023

• FIX: tck saving fix

  AntoineTheb

  committed
  af0c6d7

  Copy full SHA for af0c6d7

Commits on Oct 18, 2023

• FIX: prob tracking + WM mask

  AntoineTheb

  committed
  2cce452

  Copy full SHA for 2cce452

Commits on Oct 30, 2023

• ENH: multiple changes \n -probabilistic \n -dwi_ml \n -corner

  AntoineTheb

  committed
  75ab0bd

  Copy full SHA for 75ab0bd

Commits on Nov 1, 2023

• ENH: more fixes

  AntoineTheb

  committed
  da69c2e

  Copy full SHA for da69c2e

Commits on Nov 2, 2023

• ENH: remove last point

  AntoineTheb

  committed
  e966805

  Copy full SHA for e966805

Commits on Nov 8, 2023

• ENH: Update doc

  AntoineTheb

  committed
  f6129aa

  Copy full SHA for f6129aa

• ENH: more documentation and cleanup

  AntoineTheb

  committed
  aa9ed9d

  Copy full SHA for aa9ed9d

Commits on Nov 9, 2023

• ENH: more documentation

  AntoineTheb

  committed
  f7c1692

  Copy full SHA for f7c1692

Commits on Nov 24, 2023

• ENH: fixes

  AntoineTheb

  committed
  3c835c0

  Copy full SHA for 3c835c0

Commits on Nov 30, 2023

• ENH: Oracle optim

  AntoineTheb

  committed
  b819aa2

  Copy full SHA for b819aa2

Commits on Dec 4, 2023

• FIX: big in tracking

  AntoineTheb

  committed
  ea39761

  Copy full SHA for ea39761

• FIX: interface bug

  AntoineTheb

  committed
  8b80353

  Copy full SHA for 8b80353

Commits on Dec 5, 2023

• ENH: searching for oracle

  AntoineTheb

  committed
  9e7da20

  Copy full SHA for 9e7da20

• ENH: searching for oracle

  AntoineTheb

  committed
  26781c8

  Copy full SHA for 26781c8

• FIX: search script fixes

  AntoineTheb

  committed
  d520d24

  Copy full SHA for d520d24

• Merge branch 'to/reward' of github.com:scil-vital/TrackToLearn into to/reward

  AntoineTheb

  committed
  253abdb

  Copy full SHA for 253abdb

• FIX: search scripts

  AntoineTheb

  committed
  54e26d6

  Copy full SHA for 54e26d6

• FIX: ughhhhhh scripts

  AntoineTheb

  committed
  27cb855

  Copy full SHA for 27cb855

Commits on Dec 10, 2023

• ENH: tracking optional wm input

  AntoineTheb

  committed
  bab1f45

  Copy full SHA for bab1f45

• Merge

  

  Antoine Théberge

  committed
  943569a

  Copy full SHA for 943569a

Commits on Dec 12, 2023

• Merge

  AntoineTheb

  committed
  bd3e1b9

  Copy full SHA for bd3e1b9

Commits on Jan 3, 2024

• Merge

  AntoineTheb

  committed
  6fa0454

  Copy full SHA for 6fa0454

Commits on Jan 10, 2024

• FIX: input_wm

  AntoineTheb

  committed
  766843e

  Copy full SHA for 766843e

• ENH: prob output

  AntoineTheb

  committed
  ac80129

  Copy full SHA for ac80129

Commits on Jan 11, 2024

• ENH: multi-subject training

  AntoineTheb

  committed
  6127451

  Copy full SHA for 6127451

• ENH: multi-subject train works ?

  AntoineTheb

  committed
  5dadb59

  Copy full SHA for 5dadb59

Commits on Feb 2, 2024

• WIP: multi sub training

  AntoineTheb

  committed
  208e1f8

  Copy full SHA for 208e1f8

Commits on Feb 3, 2024

• WIP: multi sub training, need test w/ oracle

  AntoineTheb

  committed
  8bb85a5

  Copy full SHA for 8bb85a5

Commits on Feb 5, 2024

• ENH: multi sub working

  AntoineTheb

  committed
  6a69749

  Copy full SHA for 6a69749

Commits on Feb 6, 2024

• ENH: Multi sub training works

  AntoineTheb

  committed
  2fc9a05

  Copy full SHA for 2fc9a05

• Multi-subject training (#33)

  Show description for a743889
  AntoineTheb

  authored
  a743889

  Copy full SHA for a743889

Commits on Feb 8, 2024

• FIX: multi sub ref + searcher

  AntoineTheb

  committed
  9cb8c4f

  Copy full SHA for 9cb8c4f

• FIX: tracking multi sub

  AntoineTheb

  committed
  a8203d2

  Copy full SHA for a8203d2

• FIX: multi sub tracking

  AntoineTheb

  committed
  db83427

  Copy full SHA for db83427

• Merge branch 'to/reward' into atheb/multi-subject_train

  AntoineTheb

  committed
  a296ebd

  Copy full SHA for a296ebd

• FIX: merge to-reward

  AntoineTheb

  committed
  d23a8cb

  Copy full SHA for d23a8cb

Commits on Feb 9, 2024

• Merge pull request #34 from scil-vital/atheb/multi-subject_train

  Show description for 88e972c
  AntoineTheb

  authored
  88e972c

  Copy full SHA for 88e972c

Commits on Feb 14, 2024

• Merge multi subject

  AntoineTheb

  committed
  a93ae48

  Copy full SHA for a93ae48

• Merge branch 'to/reward' of github.com:scil-vital/TrackToLearn into to/reward

  AntoineTheb

  committed
  1fb5a78

  Copy full SHA for 1fb5a78

• ENH: coverage validator

  AntoineTheb

  committed
  75c3126

  Copy full SHA for 75c3126

• ENH: make covrage part of oracle

  AntoineTheb

  committed
  4cf8376

  Copy full SHA for 4cf8376

• ENH: oracle reward min length

  AntoineTheb

  committed
  bdbfdc6

  Copy full SHA for bdbfdc6

Commits on Mar 20, 2024

• ENH: cleanup part 1

  AntoineTheb

  committed
  3204d92

  Copy full SHA for 3204d92

• Merge branch 'main' into to/reward

  AntoineTheb

  committed
  a558b30

  Copy full SHA for a558b30

• Merge branch 'main' into to/reward

  AntoineTheb

  authored
  b5d0d3b

  Copy full SHA for b5d0d3b

• FIX: python3.10 workflow

  AntoineTheb

  committed
  e0e39e8

  Copy full SHA for e0e39e8

• Merge branch 'to/reward' of github.com:scil-vital/TrackToLearn into to/reward

  AntoineTheb

  committed
  8da284d

  Copy full SHA for 8da284d

• FIX: install

  AntoineTheb

  committed
  d21917b

  Copy full SHA for d21917b

• FIX: remove quiet flag

  AntoineTheb

  committed
  9ca6181

  Copy full SHA for 9ca6181

• FIX: remove reqs

  AntoineTheb

  committed
  0c1228e

  Copy full SHA for 0c1228e

• FIX: remove quiet

  AntoineTheb

  committed
  8cea68f

  Copy full SHA for 8cea68f

• FIX: add versions

  AntoineTheb

  committed
  0fc92dd

  Copy full SHA for 0fc92dd

• FIX: add versions

  AntoineTheb

  committed
  e047686

  Copy full SHA for e047686

Commits on Mar 21, 2024

• FIX: remove old tractometer

  AntoineTheb

  committed
  0866eab

  Copy full SHA for 0866eab

• FIX: workflow

  AntoineTheb

  committed
  b8284be

  Copy full SHA for b8284be

• FIX: workflow

  AntoineTheb

  committed
  5a2315d

  Copy full SHA for 5a2315d

• FIX: add flake8 workflow

  AntoineTheb

  committed
  2797e78

  Copy full SHA for 2797e78

• ENH: readme + cleanup

  AntoineTheb

  committed
  50f122a

  Copy full SHA for 50f122a

Commits on Mar 22, 2024

• ENH: cleanup + macos workflow

  AntoineTheb

  committed
  e59a45f

  Copy full SHA for e59a45f

• ENH: workflows

  AntoineTheb

  committed
  b1e0476

  Copy full SHA for b1e0476

• ENH: tests

  AntoineTheb

  committed
  3f0a6f4

  Copy full SHA for 3f0a6f4

• FIX: remove old tractometer

  AntoineTheb

  committed
  68da7a4

  Copy full SHA for 68da7a4

• ENH: further remove old tractometer

  AntoineTheb

  committed
  d827323

  Copy full SHA for d827323

• FIX: cuda assert train

  AntoineTheb

  committed
  34cb9de

  Copy full SHA for 34cb9de

• FIX: shebang

  AntoineTheb

  committed
  0764eb4

  Copy full SHA for 0764eb4

• FIX: chmod

  AntoineTheb

  committed
  56bda0d

  Copy full SHA for 56bda0d

• ENH: remove assert

  AntoineTheb

  committed
  13fbf83

  Copy full SHA for 13fbf83

Commits on Mar 26, 2024

• ENH: further cleanup

  AntoineTheb

  committed
  79e826d

  Copy full SHA for 79e826d

• ENH: remove unused scripts

  AntoineTheb

  committed
  c12b1a9

  Copy full SHA for c12b1a9

• ENH: remove unused volumes

  AntoineTheb

  committed
  6bd8fce

  Copy full SHA for 6bd8fce

• FIX: training

  AntoineTheb

  committed
  48d3ed1

  Copy full SHA for 48d3ed1

• ENH: remove scripts

  AntoineTheb

  committed
  e343a0a

  Copy full SHA for e343a0a

Commits on Mar 27, 2024

• ENH: preprint

  AntoineTheb

  committed
  1383b6b

  Copy full SHA for 1383b6b