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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,55 +1,55 @@ | ||
| name: CI | ||
| name: CI-WinDebug | ||
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| on: [push, pull_request] | ||
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| jobs: | ||
| build-Linux: | ||
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| runs-on: ubuntu-22.04 | ||
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| steps: | ||
| - uses: actions/[email protected] | ||
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| - name: Install system dependencies | ||
| run: > | ||
| sudo apt-get update; | ||
| sudo apt-get --no-install-recommends install | ||
| catch2 | ||
| cmake | ||
| libfreetype6-dev | ||
| libglew-dev | ||
| libglm-dev | ||
| libmsgpack-dev | ||
| libnetcdf-dev | ||
| libpng-dev | ||
| libxml2-dev | ||
| python-is-python3 | ||
| python3-biopython | ||
| python3-dev | ||
| python3-setuptools | ||
| python3-numpy | ||
| python3-pil | ||
| python3-pytest | ||
| - name: Install collada2gltf | ||
| run: | | ||
| wget -nv https://anaconda.org/schrodinger/collada2gltf/2.1.4/download/linux-64/collada2gltf-2.1.4-h6bb024c_0.tar.bz2 | ||
| sudo tar xf collada2gltf-*.tar.bz2 -C / bin/collada2gltf | ||
| - name: Get additional sources | ||
| run: | | ||
| git clone --depth 1 https://github.com/rcsb/mmtf-cpp.git | ||
| cp -R mmtf-cpp/include/mmtf* include/ | ||
| - name: Build | ||
| run: | | ||
| python setup.py --testing install --prefix=install-prefix | ||
| env: | ||
| DEBUG: 1 | ||
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| - name: Test | ||
| run: | | ||
| ./install-prefix/bin/pymol -ckqy testing/testing.py --run all | ||
| # build-Linux: | ||
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| # runs-on: ubuntu-22.04 | ||
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| # steps: | ||
| # - uses: actions/[email protected] | ||
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| # - name: Install system dependencies | ||
| # run: > | ||
| # sudo apt-get update; | ||
| # sudo apt-get --no-install-recommends install | ||
| # catch2 | ||
| # cmake | ||
| # libfreetype6-dev | ||
| # libglew-dev | ||
| # libglm-dev | ||
| # libmsgpack-dev | ||
| # libnetcdf-dev | ||
| # libpng-dev | ||
| # libxml2-dev | ||
| # python-is-python3 | ||
| # python3-biopython | ||
| # python3-dev | ||
| # python3-setuptools | ||
| # python3-numpy | ||
| # python3-pil | ||
| # python3-pytest | ||
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| # - name: Install collada2gltf | ||
| # run: | | ||
| # wget -nv https://anaconda.org/schrodinger/collada2gltf/2.1.4/download/linux-64/collada2gltf-2.1.4-h6bb024c_0.tar.bz2 | ||
| # sudo tar xf collada2gltf-*.tar.bz2 -C / bin/collada2gltf | ||
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| # - name: Get additional sources | ||
| # run: | | ||
| # git clone --depth 1 https://github.com/rcsb/mmtf-cpp.git | ||
| # cp -R mmtf-cpp/include/mmtf* include/ | ||
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| # - name: Build | ||
| # run: | | ||
| # python setup.py --testing install --prefix=install-prefix | ||
| # env: | ||
| # DEBUG: 1 | ||
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| # - name: Test | ||
| # run: | | ||
| # ./install-prefix/bin/pymol -ckqy testing/testing.py --run all | ||
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| build-Windows: | ||
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@@ -95,40 +95,43 @@ jobs: | |
| - name: Test | ||
| shell: cmd | ||
| run: | | ||
| dir %GITHUB_WORKSPACE% | ||
| dir %GITHUB_WORKSPACE%\\install-prefix | ||
| dir %GITHUB_WORKSPACE%\\install-prefix\\Scripts | ||
| CALL %CONDA_ROOT%\\Scripts\\activate.bat | ||
| %GITHUB_WORKSPACE%\\install-prefix\\Scripts\\pymol.bat -ckqy testing\\testing.py --run all | ||
| build-MacOS: | ||
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| runs-on: macos-latest | ||
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| env: | ||
| CONDA_ROOT: "/tmp/miniconda" | ||
| MAMBAFORGE_EXEC: ${{github.workspace}}\..\tmp\mambaforge.exe | ||
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| steps: | ||
| - uses: actions/[email protected] | ||
| - name: Set up Miniconda and Build | ||
| run: |- | ||
| curl -L -o $CONDA_ROOT.sh https://github.com/conda-forge/miniforge/releases/download/24.3.0-0/Mambaforge-MacOSX-x86_64.sh | ||
| bash $CONDA_ROOT.sh -b -p $CONDA_ROOT | ||
| export PATH="$CONDA_ROOT/bin:$PATH" | ||
| conda config --set quiet yes | ||
| conda install -y -c conda-forge -c schrodinger python cmake libpng freetype pyqt glew libxml2 numpy catch2=2.13.3 glm libnetcdf collada2gltf pytest | ||
| conda info | ||
| - name: Get additional sources | ||
| run: | | ||
| git clone --depth 1 https://github.com/rcsb/mmtf-cpp.git | ||
| cp -R mmtf-cpp/include/mmtf* include/ | ||
| - name: Build PyMOL | ||
| run: |- | ||
| export MACOSX_DEPLOYMENT_TARGET=12.0 | ||
| export PATH="$CONDA_ROOT/bin:$PATH" | ||
| python setup.py install --prefix=${GITHUB_WORKSPACE}/install-prefix | ||
| - name: Test | ||
| run: |- | ||
| export PATH="$CONDA_ROOT/bin:$PATH" | ||
| ${GITHUB_WORKSPACE}/install-prefix/bin/pymol -ckqy testing/testing.py --run all | ||
| # build-MacOS: | ||
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| # runs-on: macos-latest | ||
|
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| # env: | ||
| # CONDA_ROOT: "/tmp/miniconda" | ||
| # MAMBAFORGE_EXEC: ${{github.workspace}}\..\tmp\mambaforge.exe | ||
|
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| # steps: | ||
| # - uses: actions/[email protected] | ||
| # - name: Set up Miniconda and Build | ||
| # run: |- | ||
| # curl -L -o $CONDA_ROOT.sh https://github.com/conda-forge/miniforge/releases/download/24.3.0-0/Mambaforge-MacOSX-x86_64.sh | ||
| # bash $CONDA_ROOT.sh -b -p $CONDA_ROOT | ||
| # export PATH="$CONDA_ROOT/bin:$PATH" | ||
| # conda config --set quiet yes | ||
| # conda install -y -c conda-forge -c schrodinger python cmake libpng freetype pyqt glew libxml2 numpy catch2=2.13.3 glm libnetcdf collada2gltf pytest | ||
| # conda info | ||
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| # - name: Get additional sources | ||
| # run: | | ||
| # git clone --depth 1 https://github.com/rcsb/mmtf-cpp.git | ||
| # cp -R mmtf-cpp/include/mmtf* include/ | ||
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| # - name: Build PyMOL | ||
| # run: |- | ||
| # export MACOSX_DEPLOYMENT_TARGET=12.0 | ||
| # export PATH="$CONDA_ROOT/bin:$PATH" | ||
| # python setup.py install --prefix=${GITHUB_WORKSPACE}/install-prefix | ||
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| # - name: Test | ||
| # run: |- | ||
| # export PATH="$CONDA_ROOT/bin:$PATH" | ||
| # ${GITHUB_WORKSPACE}/install-prefix/bin/pymol -ckqy testing/testing.py --run all | ||