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Update DPSV
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sbslee committed Oct 3, 2021
1 parent 7f66833 commit fa8deab
Showing 1 changed file with 9 additions and 3 deletions.
12 changes: 9 additions & 3 deletions docs/profile-links.csv
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Gene,SV Name,Source,Sample ID,Genotype,Copy Number Profile,Allele Fraction Profile,BAM ID
CYP2B6,Hybrid,`GeT-RM <https://pubmed.ncbi.nlm.nih.gov/26621101/>`__,NA19178,\*6/\*29,:download:`click <https://raw.githubusercontent.com/sbslee/pypgx-data/main/dpsv/CYP2B6-1-CN.png>`,:download:`click <https://raw.githubusercontent.com/sbslee/pypgx-data/main/dpsv/CYP2B6-1-AF.png>`,3fcca708192c4ffe8e57318c7d64e480
CYP2D6,Deletion,`GeT-RM <https://pubmed.ncbi.nlm.nih.gov/26621101/>`__,NA18861,\*5/\*29,:download:`click <https://raw.githubusercontent.com/sbslee/pypgx-data/main/dpsv/CYP2D6-1-CN.png>`,:download:`click <https://raw.githubusercontent.com/sbslee/pypgx-data/main/dpsv/CYP2D6-1-AF.png>`,543558ae08cd44b3850fc7b835484037
Gene,Star Allele,SV Name,Genotype,Copy Number,Allele Fraction,Source,Sample ID,BAM ID
CYP2A6,\*4,DeletionHet,\*1/\*4,:download:`Profile <https://raw.githubusercontent.com/sbslee/pypgx-data/main/dpsv/CYP2A6-1-CN.png>`,:download:`Profile <https://raw.githubusercontent.com/sbslee/pypgx-data/main/dpsv/CYP2A6-1-AF.png>`,`GeT-RM <https://pubmed.ncbi.nlm.nih.gov/26621101/>`__,NA18617,0b7cc95044c54d86a81151d856d0c5b2
CYP2A6,\*4,DeletionHom,\*4/\*4,:download:`Profile <https://raw.githubusercontent.com/sbslee/pypgx-data/main/dpsv/CYP2A6-2-CN.png>`,:download:`Profile <https://raw.githubusercontent.com/sbslee/pypgx-data/main/dpsv/CYP2A6-2-AF.png>`,`GeT-RM <https://pubmed.ncbi.nlm.nih.gov/26621101/>`__,NA18952,92ac6fc0f69345aabb9e7bd47452ed70
CYP2B6,\*29,Hybrid,\*6/\*29,:download:`Profile <https://raw.githubusercontent.com/sbslee/pypgx-data/main/dpsv/CYP2B6-1-CN.png>`,:download:`Profile <https://raw.githubusercontent.com/sbslee/pypgx-data/main/dpsv/CYP2B6-1-AF.png>`,`GeT-RM <https://pubmed.ncbi.nlm.nih.gov/26621101/>`__,NA19178,3fcca708192c4ffe8e57318c7d64e480
CYP2D6,\*5,Deletion,\*5/\*29,:download:`Profile <https://raw.githubusercontent.com/sbslee/pypgx-data/main/dpsv/CYP2D6-1-CN.png>`,:download:`Profile <https://raw.githubusercontent.com/sbslee/pypgx-data/main/dpsv/CYP2D6-1-AF.png>`,`GeT-RM <https://pubmed.ncbi.nlm.nih.gov/26621101/>`__,NA18861,543558ae08cd44b3850fc7b835484037
CYP2D6,\*4x2,Duplication,\*2/\*4x2,:download:`Profile <https://raw.githubusercontent.com/sbslee/pypgx-data/main/dpsv/CYP2D6-2-CN.png>`,:download:`Profile <https://raw.githubusercontent.com/sbslee/pypgx-data/main/dpsv/CYP2D6-2-AF.png>`,`GeT-RM <https://pubmed.ncbi.nlm.nih.gov/26621101/>`__,NA19819,a04f109738f34a358850f5f69d7d8814
CYP2D6,\*68+\*4,Tandem1,\*139/\*68+\*4,:download:`Profile <https://raw.githubusercontent.com/sbslee/pypgx-data/main/dpsv/CYP2D6-3-CN.png>`,:download:`Profile <https://raw.githubusercontent.com/sbslee/pypgx-data/main/dpsv/CYP2D6-3-AF.png>`,`GeT-RM <https://pubmed.ncbi.nlm.nih.gov/26621101/>`__,NA11832,22d9ea3d16804243afbfea7e776c5237
CYP2D6,\*36+\*10,Tandem2A,\*2/\*36+\*10,:download:`Profile <https://raw.githubusercontent.com/sbslee/pypgx-data/main/dpsv/CYP2D6-4-CN.png>`,:download:`Profile <https://raw.githubusercontent.com/sbslee/pypgx-data/main/dpsv/CYP2D6-4-AF.png>`,`GeT-RM <https://pubmed.ncbi.nlm.nih.gov/26621101/>`__,NA18564,4323a15d7b5d4bf2b204e0c0088ba923
CYP2D6,\*36x2+\*10,Tandem2B,\*1/\*36x2+\*10,:download:`Profile <https://raw.githubusercontent.com/sbslee/pypgx-data/main/dpsv/CYP2D6-5-CN.png>`,:download:`Profile <https://raw.githubusercontent.com/sbslee/pypgx-data/main/dpsv/CYP2D6-5-AF.png>`,`GeT-RM <https://pubmed.ncbi.nlm.nih.gov/26621101/>`__,NA18524,ba64fb6dbb0a4b36a5cbe53bd8706ca7

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