Update all non-conflicting dependencies from feature/untested-release branch

.github/workflows/build-base-images.yaml

@@ -57,7 +57,7 @@ jobs:
       - name: Prepare formatted tags
         run: |
           echo FORMATTED_TAG=${{ matrix.base_image_tag }} | sed -e "s/-focal$//" | sed -e "s/20.04$/latest/" >> $GITHUB_ENV
-      - uses: docker/build-push-action@v4
+      - uses: docker/build-push-action@v6
         with:
           context: save-deploy/base-images
           push: true
@@ -83,7 +83,7 @@ jobs:
           registry: ghcr.io
           username: saveourtool
           password: ${{ secrets.GITHUB_TOKEN }}
-      - uses: docker/build-push-action@v4
+      - uses: docker/build-push-action@v6
         with:
           context: save-demo-cpg/builder
           push: true

.github/workflows/build_and_test.yml

@@ -45,7 +45,7 @@ jobs:
         with:
           fetch-depth: 2
       - id: git-changed-files
-        uses: tj-actions/changed-files@v40
+        uses: tj-actions/changed-files@v45
         with:
           files_yaml: |
             root_gradle:

.github/workflows/helm_push.yml

@@ -42,10 +42,10 @@ jobs:
         name: Prepare to build from branch
         run: |
           git switch --force-create ${{ inputs.branch }} origin/${{ inputs.branch }}
-      - uses: gittools/actions/gitversion/setup@v0.10.2
+      - uses: gittools/actions/gitversion/setup@v3.0.0
         with:
           versionSpec: 5.x
-      - uses: gittools/actions/gitversion/execute@v0.10.2
+      - uses: gittools/actions/gitversion/execute@v3.0.0
         id: calculate-semver
         with:
           targetPath: ${{ env.CHARTS_DIR }}

README.md

@@ -13,24 +13,28 @@ Our key focus is to make life of developers who analyze code easier.
     - Use SAVE to create an **online demo for your analyzer** and set it up for your community's use;
     - Benchmarks Archive with the **list of popular benchmarks** (with a reference to [awesome-benchmarks](https://github.com/saveourtool/awesome-benchmarks)).
 
-2. **VULN** - A platform designed for the **reporting**, aggregation, and deduplication of one-day **vulnerabilities**.
+2. **COSV** - A platform designed for the **reporting**, aggregation, and deduplication of one-day **vulnerabilities**.
 
-Additionally, on our platform we host **contests** in the field of code analysis. 
+Additionally, on our platform we host **contests** in the field of code analysis.
 This provides an opportunity for you to submit your automated solutions for bug detection, and compete with other innovative projects.
 
 ## Links
 - Collection of Code Analyzers Demo: [Demo](https://saveourtool.com/demo)
 - Benchmarks Archive: [Benchmarks](https://saveourtool.com/awesome-benchmarks)
 - CI projects: [CI Projects](https://saveourtool.com/projects)
-- Vulnerabilities Collection: [1-day Vulnerabilities](https://saveourtool.com/vuln/list)
+- Vulnerabilities Collection: [1-day Vulnerabilities](https://cosv.gitlink.org.cn)
 
 ## Motivation
 - [Motivation of **SAVE** and more details](info/SaveMotivation.md)
 - Motivation of **VULN** and more details: TBD
 
 ## High-level perspective
+#### SAVE
 ![SAVE processing](https://user-images.githubusercontent.com/58667063/146387903-24ba9c91-a2a3-45e7-a07a-cb7bc388e4aa.jpg)
 
+#### COSV
+<img width="1306" alt="image" src="https://github.com/saveourtool/save-cloud/assets/58667063/008b0976-98c2-4195-bdf5-570a70b07827">
+
 ## Build and deploy
 To build the project and run all tests, execute `./gradlew build`. 
 
@@ -44,4 +48,10 @@ For more detailed instructions, including **deployment instructions**, see [save
   proxied as configured in [dev-server.js](../save-frontend/webpack.config.d/dev-server.js). User will be hardcoded with `admin` user. 
 
 ## Architecture and design
-<img src="/info/img/save-diagram.png" width="512px"/>
+Save:
+
+<img src="/info/img/save-diagram.png" width="768px"/>
+
+COSV:
+
+<img src="/info/img/cosv-diagram.PNG" width="768px"/>

gradle/libs.versions.toml

@@ -1,12 +1,12 @@
 [versions]
-kotlin = "1.9.10"
-jetbrains-annotations = "24.0.1"
+kotlin = "1.9.25"
+jetbrains-annotations = "26.0.1"
 save-cli = "0.3.10"
 ktor = "2.3.6"
 okio = "3.3.0"
-serialization = "1.6.0"
-kotlinx-datetime = "0.4.1"
-kotlinx-coroutines = "1.7.3"
+serialization = "1.6.3"
+kotlinx-datetime = "0.5.0"
+kotlinx-coroutines = "1.8.1"
 kotlin-wrappers = "1.0.0-pre.634"
 spring-boot = "2.7.17"
 spring-cloud = "3.1.9"
@@ -18,7 +18,7 @@ diktat = "2.0.0"
 detekt = "1.23.3"
 liquibase-core = "4.24.0"
 docker-java = "3.3.4"
-jgit = "6.7.0.202309050840-r"
+jgit = "7.0.0.202409031743-r"
 mockito = "5.3.1"
 mockito-kotlin = "5.0.0"
 # only in save-cli
@@ -36,7 +36,7 @@ kotlinx-cli = "0.3.6"
 spotless = "6.22.0"
 fabric8 = "6.9.2"
 arrow-kt = "1.2.1"
-publish = "1.3.0"
+publish = "2.0.0"
 cpg = "7.1.2"
 # should be taken from cpg
 cpg-neo4j-ogm = { strictly = "4.0.6" }

gradle/wrapper/gradle-wrapper.properties

@@ -1,7 +1,6 @@
 distributionBase=GRADLE_USER_HOME
 distributionPath=wrapper/dists
-distributionSha256Sum=3e1af3ae886920c3ac87f7a91f816c0c7c436f276a6eefdb3da152100fef72ae
-distributionUrl=https\://services.gradle.org/distributions/gradle-8.4-bin.zip
+distributionUrl=https\://services.gradle.org/distributions/gradle-8.10.2-bin.zip
 networkTimeout=10000
 validateDistributionUrl=true
 zipStoreBase=GRADLE_USER_HOME

save-cloud-common/src/nativeMain/kotlin/com/saveourtool/save/utils/PlatformUtils.kt

@@ -8,7 +8,7 @@ import kotlinx.cinterop.ExperimentalForeignApi
 import kotlinx.cinterop.toKString
 
 actual class AtomicLong actual constructor(value: Long) {
-    private val kotlinAtomicLong = kotlin.native.concurrent.AtomicLong(value)
+    private val kotlinAtomicLong = kotlin.concurrent.AtomicLong(value)
 
     actual fun get(): Long = kotlinAtomicLong.value
 

save-cosv-frontend/src/main/resources/index.html

@@ -23,7 +23,7 @@
     <meta name="msapplication-TileColor" content="#da532c">
     <meta name="theme-color" content="#ffffff">
     <!--  highlight.js for code highlighting  -->
-    <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/highlight.js/11.9.0/styles/intellij-light.min.css" title="Intellij Light" >
+    <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/highlight.js/11.10.0/styles/intellij-light.min.css" title="Intellij Light" >
 </head>
 
 <body style="background-color: #fcfcfc" id="main-body" class="save">

save-demo-agent/src/nativeTest/kotlin/com/saveoourtool/save/demo/agent/ServerTest.kt

@@ -10,6 +10,7 @@ import io.ktor.utils.io.core.*
 import kotlinx.coroutines.CoroutineScope
 import kotlinx.coroutines.Dispatchers
 import kotlinx.coroutines.launch
+import kotlin.experimental.ExperimentalNativeApi
 import kotlin.test.*
 
 class ServerTest {
@@ -27,6 +28,7 @@ class ServerTest {
         server.stop()
     }
 
+    @OptIn(ExperimentalNativeApi::class)
     @Test
     fun testServerStartup() {
         httpClient().use { client ->

save-frontend-common/karma.config.d/custom-config.js

@@ -8,7 +8,7 @@
             test: /\.js$/,
             use: {loader: 'istanbul-instrumenter-loader'},
             // fixme: need to exclude Kotlin dependencies
-            include: [path.resolve(__dirname, '../save-cloud-save-frontend-common/kotlin/')]
+            include: [path.resolve(__dirname, '../save-cloud-frontend-common/kotlin/')]
         }
     )
     config.coverageIstanbulReporter = {
@@ -24,12 +24,12 @@ config.set({
         }
     },
     proxies: {
-        // serving mockServiceWorker.js.js from location relative to base url
+        // serving mockServiceWorker.js from location relative to base url
         // the file should be included into Karma's `files` to be served by server at all
-        '/mockServiceWorker.js': '/base/mockServiceWorker.js',
+        '/mockServiceWorker.js': '/base/node_modules/mockServiceWorker.js',
     },
 })
 
 // http://karma-runner.github.io/6.3/config/files.html
-// 'All of the relative patterns will get resolved using the basePath first.', where basePath is set by KGP to `node_modules`
-config.files.push('./mockServiceWorker.js')
+// 'All of the relative patterns will get resolved using the basePath first.', where basePath is NOT set by KGP to `node_modules` after migration to 1.9
+config.files.push('./node_modules/mockServiceWorker.js')

save-frontend/karma.config.d/custom-config.js

@@ -24,12 +24,12 @@ config.set({
         }
     },
     proxies: {
-        // serving mockServiceWorker.js.js from location relative to base url
+        // serving mockServiceWorker.js from location relative to base url
         // the file should be included into Karma's `files` to be served by server at all
-        '/mockServiceWorker.js': '/base/mockServiceWorker.js',
+        '/mockServiceWorker.js': '/base/node_modules/mockServiceWorker.js',
     },
 })
 
 // http://karma-runner.github.io/6.3/config/files.html
-// 'All of the relative patterns will get resolved using the basePath first.', where basePath is set by KGP to `node_modules`
-config.files.push('./mockServiceWorker.js')
+// 'All of the relative patterns will get resolved using the basePath first.', where basePath is NOT set by KGP to `node_modules` after migration to 1.9
+config.files.push('./node_modules/mockServiceWorker.js')

save-frontend/src/main/kotlin/com/saveourtool/save/frontend/externals/graph/sigma/layouts/LayoutCircular.kt

@@ -1,15 +1,12 @@
 @file:Suppress("FILE_NAME_MATCH_CLASS", "HEADER_MISSING_IN_NON_SINGLE_CLASS_FILE")
-@file:JsModule("@react-sigma/layout-circular")
-@file:JsNonModule
 
 package com.saveourtool.save.frontend.externals.graph.sigma.layouts
 
-import react.*
-
 /**
  * @param settings
  * @return [LayoutInstance] with positions and assign functions
  */
-@JsName("useLayoutCircular")
+@JsModule("@react-sigma/layout-circular")
+@JsNonModule
 @JsExport
 external fun useLayoutCircular(settings: dynamic = definedExternally): LayoutInstance

save-frontend/src/main/kotlin/com/saveourtool/save/frontend/externals/graph/sigma/layouts/LayoutForceAtlas2.kt

@@ -1,14 +1,12 @@
 @file:Suppress("FILE_NAME_MATCH_CLASS", "HEADER_MISSING_IN_NON_SINGLE_CLASS_FILE")
-@file:JsModule("@react-sigma/layout-forceatlas2")
-@file:JsNonModule
 
 package com.saveourtool.save.frontend.externals.graph.sigma.layouts
 
-import react.*
-
 /**
  * @param settings
  * @return [LayoutInstance] with positions and assign functions
  */
-@JsName("useLayoutForceAtlas2")
+@JsModule("@react-sigma/layout-forceatlas2")
+@JsNonModule
+@JsExport
 external fun useLayoutForceAtlas2(settings: dynamic = definedExternally): LayoutInstance

save-frontend/src/main/kotlin/com/saveourtool/save/frontend/externals/graph/sigma/layouts/LayoutRandom.kt

@@ -1,15 +1,12 @@
 @file:Suppress("FILE_NAME_MATCH_CLASS", "HEADER_MISSING_IN_NON_SINGLE_CLASS_FILE")
-@file:JsModule("@react-sigma/layout-random")
-@file:JsNonModule
 
 package com.saveourtool.save.frontend.externals.graph.sigma.layouts
 
-import react.*
-
 /**
  * @param settings
  * @return [LayoutInstance] with positions and assign functions
  */
-@JsName("useLayoutRandom")
+@JsModule("@react-sigma/layout-random")
+@JsNonModule
 @JsExport
 external fun useLayoutRandom(settings: dynamic = definedExternally): LayoutInstance

save-frontend/src/main/resources/index.html

@@ -23,7 +23,7 @@
     <meta name="msapplication-TileColor" content="#da532c">
     <meta name="theme-color" content="#ffffff">
     <!--  highlight.js for code highlighting  -->
-    <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/highlight.js/11.9.0/styles/intellij-light.min.css" title="Intellij Light" >
+    <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/highlight.js/11.10.0/styles/intellij-light.min.css" title="Intellij Light" >
 </head>
 
 <body style="background-color: #fcfcfc" id="main-body" class="save">