Merge pull request #311 from sandialabs/bump_kokkos_v4_4_1

    Bump version to 1.6.0
    
    - Dropped support for Kokkos < 4
    - Updated vendored Kokkos and Kokkos-Kernels to 4.4.01
    - Updated vendored pybind11 to 2.13.6
    - Fixes to support numpy > 2

CMakeLists.txt

@@ -181,7 +181,7 @@ else() # Raw CMake Project
   set(KOKKOSKERNELS_IN_TRILINOS OFF)
   set(KOKKOSKERNELS_EXISTING_ELSEWHERE OFF)
   set(KOKKOSKERNELS_BUILT_FOR_USER OFF)
-  set(KOKKOS_MIN "3.3.01")
+  set(KOKKOS_MIN "4.0.00")
 
   if (Trilinos_PREFIX)
     FIND_PACKAGE(Trilinos COMPONENTS Kokkos KokkosKernels OPTIONAL_COMPONENTS Gtest)
@@ -318,11 +318,7 @@ else() # Raw CMake Project
       get_directory_property(Kokkos_VERSION DIRECTORY kokkos DEFINITION Kokkos_VERSION)
       message(STATUS "Kokkos Version: ${Kokkos_VERSION}")
   endif()
-  if(Kokkos_VERSION VERSION_LESS "3.7")
-    set(KOKKOS_THREADS_ARG "--kokkos-threads")
-  else()
-    set(KOKKOS_THREADS_ARG "--kokkos-num-threads")
-  endif()
+  set(KOKKOS_THREADS_ARG "--kokkos-num-threads")
 
   if (KOKKOSKERNELS_IN_TRILINOS)
     if (Compadre_USE_CUDA)
@@ -357,6 +353,8 @@ else() # Raw CMake Project
       SET(KokkosKernels_ENABLE_TPL_CUBLAS OFF)
       OPTION(KokkosKernels_ENABLE_TPL_CUSPARSE "" OFF)
       SET(KokkosKernels_ENABLE_TPL_CUSPARSE OFF)
+      OPTION(KokkosKernels_ENABLE_TPL_CUSOLVER "" OFF)
+      SET(KokkosKernels_ENABLE_TPL_CUSOLVER OFF)
       OPTION(KokkosKernels_INST_MEMSPACE_CUDAUVMSPACE "" OFF)
       SET(KokkosKernels_INST_MEMSPACE_CUDAUVMSPACE OFF)
       OPTION(KokkosKernels_INST_EXECSPACE_THREADS "" ${Kokkos_ENABLE_THREADS})

cmake/Compadre_Version.txt

@@ -1 +1 @@
-1.5.9
+1.6.0

kokkos-kernels/.clang-format

@@ -4,3 +4,4 @@ SortIncludes: false
 AlignConsecutiveAssignments: true
 AllowShortCaseLabelsOnASingleLine: true
 AllowShortIfStatementsOnASingleLine: true
+ColumnLimit: 120

kokkos-kernels/.git-blame-ignore-revs

@@ -0,0 +1,19 @@
+#
+# Add formatting and other uninteresting commits here and
+# 'git blame $file' will skip them IF
+# A) you have it configured to do so globally (dangerous, this will break git blame on repos that don't have a .git-blame-ignore-revs file.
+#   git config --global blame.ignoreRevsFile .git-blame-ignore-revs
+# OR
+# B) you have it configured to do so locally (tedious, you have to remember to do this in every KK clone)
+#   git config blame.ignoreRevsFile .git-blame-ignore-revs
+# OR
+# C) you have an aliased blame command for KokkosKernels:
+#   git config --global alias.kkblame 'blame --ignore-revs-file=.git-blame-ignore-revs'
+#   NOTE: this implies you run 'git kkblame $file'
+# OR
+# D) you explicitly tell blame to skip them
+#  git blame --ignore-revs-file=.git-blame-ignore-revs $file
+#
+# List skips here:
+985c3a9e7343c2f612560024cae4d968f800c8ac
+0ffb820881335beb0e78463c19988a0c61044705

kokkos-kernels/.github/SECURITY.md

@@ -0,0 +1,14 @@
+# Security Policy
+
+## Supported Versions
+
+Kokkos Kernels will issue vulnerability fixes in the develop branch of the project repository.
+Typically a patch release will be issued shortly after a vulnerability is detected and fixed.
+The project does not typically issue patch releases for older versions and if it happens, announcements will be made on our website and/or slack channel.
+
+## Reporting a Vulnerability
+
+To report a security issue, please email [email protected] and [email protected] with a description of the issue, the steps you took to create the issue, affected versions, and, if known, mitigations for the issue.
+Our vulnerability management team will respond within 5 working days of your email.
+If the issue is confirmed as a vulnerability, we will open a Security Advisory.
+This project follows a 90 day disclosure timeline.

kokkos-kernels/.github/dependabot.yml

@@ -0,0 +1,11 @@
+version: 2
+updates:
+  - package-ecosystem: github-actions
+    directory: /
+    schedule:
+      interval: weekly
+
+  - package-ecosystem: pip
+    directory: /docs
+    schedule:
+      interval: weekly

kokkos-kernels/.github/workflows/at2.yml

@@ -0,0 +1,29 @@
+name: github-AT2
+
+on: 
+  pull_request:
+    paths-ignore:
+    - '**/*.rst'
+    - '**/*.md'
+    - '**/requirements.txt'
+    - '**/*.py'
+    - 'docs/**'
+    types: [ opened, reopened, synchronize ]
+
+permissions:
+  contents: none
+
+# Cancels any in progress 'workflow' associated with this PR
+concurrency:
+  group: ${{ github.workflow }}-${{ github.ref }}
+  cancel-in-progress: true
+
+jobs:
+  mi210:
+    uses: ./.github/workflows/mi210.yml
+  h100:
+    uses: ./.github/workflows/h100.yml
+  bdw:
+    uses: ./.github/workflows/bdw.yml
+  #spr:
+    #uses: ./.github/workflows/spr.yml