v0.5.0-alpha

💥 BREAKING CHANGES

• due to d3f2c5d - use ajv for JSON schema validation instead of @exodus/schemasafe (commit by @timakro):

  The catalogue.json of your project needs to be adjusted. Category groups, i.e. objects that have the childCategories property now require the additional property "fieldType": "group".

🐛 Bug Fixes

• 62d8ca0 - add project to the request to the ccp-pm (commit by @patrickskowronekdkfz)
• 8ce478c - remove url parameter for PM (commit by @patrickskowronekdkfz)
• fba5983 - handle null values (commit by @patrickskowronekdkfz)
• d5914ea - typo in ast docs (commit by @patrickskowronekdkfz)

🔧 Chores

• afdc75e - rename properties in PM request body to use dash instead of underscore (commit by @timakro)
• f8e9ef6 - remove a check I don't think we need anymore (commit by @timakro)
• 709ab2d - stricter catalogue typing and more JSDoc (commit by @timakro)
• d3f2c5d - use ajv for JSON schema validation instead of @exodus/schemasafe (commit by @timakro)
• dea110a - add npm run schemagen to automatically generate JSON schema (commit by @timakro)
• 2058e19 - validate options and catalogue JSON in GitHub actions (commit by @timakro)
• 246133e - include JSON schemas in package so users can check it if they want (commit by @timakro)
• 3aa5667 - run Svelte 5 migration script (commit by @timakro)
• e3e15b0 - get the app to work on Svelte 5 (commit by @timakro)
• 07c10b3 - use replace instead of replaceAll for compatibility (commit by @timakro)
• 6e5e905 - refactor ResultSummaryComponent so it does not modify the lens options (commit by @timakro)
• 0e445c1 - fix type errors introduced by the Svelte 5 migration script (commit by @timakro)
• 1e812e7 - refactor error toasts to use $state() instead of writable() (commit by @timakro)
• dd37cbe - change error toasts back to use writable() (commit by @timakro)
• 504d394 - remove the notice that we are using Svelte 4 from README.md (commit by @timakro)
• aa96f5d - fix result table (commit by @timakro)
• cbba7b2 - some changes to improve the issue reporting (commit by @patrickskowronekdkfz)
• 40878a3 - improved the pull request template (commit by @patrickskowronekdkfz)
• 8d78502 - add Lens Book (commit by @timakro)
• 88f4345 - fix DataTreeElement toggling not working in Svelte 5 (commit by @timakro)
• 53c6da9 - move bash scripts to scripts directory (commit by @timakro)
• becb453 - move JSON schema files to schema directory (commit by @timakro)
• de76117 - set license in package.json to Apache 2.0 (commit by @timakro)
• e6ba7a9 - include credentials in spot requests also in dev builds (commit by @timakro)
• b2df628 - explicity expose types, update to Vite 6, git rid of svelte-preprocess (commit by @timakro)
• 2e7caf2 - update dependencies (commit by @timakro)
• e86e0e4 - add typedoc to dev dependencies and other small fixes (commit by @timakro)
• e121973 - remove eslint temporarily (commit by @timakro)
• 0e1d3f0 - update lint-staged (commit by @timakro)
• 2fba9d3 - add ESLint again (commit by @timakro)
• 6187b37 - fix and/or ignore ESLint errors (commit by @timakro)
• d0f4527 - another attempt at fixing the language server overload problem (commit by @timakro)
• 2474279 - get rid of some unused dependencies (commit by @timakro)
• 0b1a050 - simplify catalogueKeyToResponseKeyMap (commit by @timakro)
• 8478c48 - simplify siteMappings (commit by @timakro)
• 78f544b - add index.html that we can use for testing when CCP Explorer is gone (commit by @timakro)
• 3b4bd1f - build and deploy mdbook and TypeDoc with GitHub Actions on push to main (commit by @timakro)
• c8d41d8 - change deprecation notice for getCriteriaAPI (commit by @timakro)
• a5fa171 - add negotiateOptions.authorizationHeader to options JSON schema (commit by @timakro)
• 8725d20 - add JSON schema validation to setOptions and setCatalogue functions (commit by @timakro)
• bd17fd1 - add public setMeasures function as alternative to component (commit by @timakro)
• afad9d6 - fix removing criteria from search bar (commit by @timakro)
• 4476bc5 - remove icon store and move all icons to the Lens options (commit by @timakro)
• eb94db3 - add rollup as dev dependency for macos (commit by @patrickskowronekdkfz)
• 730eb9a - rename test sites in index.html and add number range to test catalogue (commit by @timakro)
• 8797769 - fix NumberInputComponent in Svelte 5 (commit by @timakro)
• 967d01b - add TODO (commit by @timakro)
• 2e9155a - remove packages/demo and move packages/lib/src to src (commit by @timakro)
• 3cc5974 - remove Dockerfile and Docker CI and update/clean up some scripts in package.json (commit by @timakro)
• a7fa748 - update README.md and add LICENSE.txt (commit by @timakro)
• d4ad3a6 - run lint-staged on all files (commit by @timakro)
• 164f776 - fix 2-bug-report.yml (commit by @timakro)
• 2d4b817 - format everything with prettier (commit by @timakro)
• a1ea3eb - make ESLint igno...

v0.4.6

💥 BREAKING CHANGES

• due to d76fccd - make the negotiator Authorization header configurable in lens options (commit by @timakro):

  If you have "negotiateOptions" in your lens options, you must add a key "authorizationHeader" under "negotiateOptions" that contains the value of the HTTP Authorization header (https://developer.mozilla.org/en-US/docs/Web/HTTP/Headers/Authorization), e.g. "Basic <base64string>"

• due to cd8bd58 - change the valid values of the "type" prop of the <lens-negotiate-button> component (commit by @timakro):

  If you are using <lens-negotiate-button> in your application change the value of the "type" prop to "Negotiator" if it was "bbmri" before or to "ProjectManager" if it was "ccp" before.

• due to eff5622 - turn Status into a tagged union (commit by @timakro):

  The type definition of the Status type changed slightly. If you are reading or writing the ResponseStore you may have to adjust your code.

✨ New Features

• 42fe931 - also replace % in aggregatedValues (commit by @patrickskowronekdkfz)
• a5d8942 - improve BBMRI negotiator error handling and do some cleanup (commit by @timakro)
• 725ee4d - add a close button to close error toasts (commit by @timakro)
• b6dc33c - add getCatalogueAPI() (commit by @timakro)
• d76fccd - make the negotiator Authorization header configurable in lens options (commit by @timakro)
• 339138f - add message for empty charts (commit by @valeriesauer)

🐛 Bug Fixes

• 4d04090 - fix that the query modified dialog was not shown when clearing the search bar (commit by @timakro)
• 2f69fc9 - add missing fields "site_id" and "collection_name" to negotiator options in options schema (commit by @timakro)
• d0fb1bf - forgot to include a file in the commit (commit by @timakro)
• fc86808 - not clickable links fix (commit by @DenisKoether)
• 7dc154d - return 0 in getAggregatedPopulationForStratumCode if there are no responses (commit by @timakro)

🔧 Chores

• d6db41b - remove problematic CQL line from patientsMeasure (commit by @timakro)
• b9f497e - fix vite warning (commit by @timakro)
• dab5908 - remove unsed var criteria in ast2cql translator (commit by @patrickskowronekdkfz)
• 722a8d1 - deprecate getCriteriaAPI (commit by @timakro)
• a358267 - remove fragment-development.css (commit by @timakro)
• cd8bd58 - change the valid values of the "type" prop of the component (commit by @timakro)
• 8131daf - log error to console if a site is missing from negotiateOption.siteMappings in lens options (commit by @timakro)
• eff5622 - turn Status into a tagged union (commit by @timakro)
• f68ec46 - only show "No Data Available" when no responses are pending (commit by @timakro)
• 47cf0d1 - remove unused "label" property from ChartDataSets (commit by @timakro)
• f75246a - show "No Data Available" if all datapoints are 0 (commit by @timakro)
• eca08c3 - update/correct ccp catalogue (commit by @patrickskowronekdkfz)
• 538ae43 - remove nodeType from AST (commit by @timakro)
• b7aecdd - resolve some small issue around ccp-explorer (commit by @patrickskowronekdkfz)
• 6c4932e - remove remaining mentions of nodeType (commit by @timakro)

v0.4.5

🐛 Bug Fixes

• af52f75 - fix build (commit by @timakro)

v0.4.4

💥 BREAKING CHANGES

• due to 9f202ba - add subgroupes to catalogue (commit by @patrickskowronekdkfz):

  The addPercentageSignToCriteria function is no longer supported. You must explicitly define your subgroups as they will no longer be generated automatically.

✨ New Features

• a7c4def - add product of tmn-c and tmn-p (commit by @patrickskowronekdkfz)
• 8406c9d - remove styling of search-modified button (commit by @patrickskowronekdkfz)
• cff6c00 - add the option to show user-facing errors as toasts (commit by @timakro)
• 1054126 - improve error toasts: tweak color, transition out (commit by @timakro)
• ec1052b - added support for logarithmic scale on bar charts (commit by @DenisKoether)
• 2b51e67 - show user-facing errors for all instances of console.error() (commit by @timakro)
• ea06b39 - added histo counting related to ffpe samples (commit by @patrickskowronekdkfz)
• 20d793a - implement project manager connection (commit by @patrickskowronekdkfz)
• aaff922 - update marker catalogue
• e7668f2 - send human readable in base64 to pm (commit by @patrickskowronekdkfz)
• 19d31e4 - implemented lens-query-updated event (commit by @torbrenner)
• 17ba754 - added window event for response store updates (commit by @torbrenner)
• d472e7a - allow import of ast in querystore (commit by @torbrenner)
• a45bbc4 - support defining system for a criteria added to the query (commit by @torbrenner)
• 9f202ba - add subgroupes to catalogue (commit by @patrickskowronekdkfz)
• 07abee9 - added info link for catalogue catagories (commit by @patrickskowronekdkfz)

🐛 Bug Fixes

• 2178021 - search for name and key when clicked on a char (commit by @patrickskowronekdkfz)
• da85c1b - searchbar: clear input text when no matches are found and clear button is clicked (commit by @valeriesauer)
• aa3bbd0 - typo in README.md (commit by @timakro)
• 5a9a048 - some typescript errors (commit by @timakro)
• 5bf95cd - typescript errors (commit by @timakro)
• 2d5432e - typescript errors (commit by @timakro)
• 443b160 - typescript errors (commit by @timakro)
• 4102471 - typescript errors (commit by @timakro)
• fa11b7c - typescript errors (commit by @timakro)
• ea45b19 - typescript errors (commit by @timakro)
• 67c409b - rotated bar chart (commit by @DenisKoether)
• 0633936 - typescript errors (commit by @timakro)
• 17310d1 - typescript errors (commit by @timakro)
• 6b0eb77 - typescript errors (commit by @timakro)
• 60bebaa - typescript errors (commit by @timakro)
• 67420d8 - typescript errors, potentially breaking (commit by @timakro)
• 5cabf06 - typescript errors (commit by @timakro)
• 56d26ce - typescript errors, potentially regression (commit by @timakro)
• ff4e34c - typescript errors (commit by @timakro)
• 508842f - typescript errors (commit by @timakro)
• fc1d1cf - issue#174 - criteria from autocompleteComponent are now added to correct subquery (commit by @thkoehler11)
• e3545de - config (commit by @patrickskowronekdkfz)
• 562ca6f - use btoa (commit by @patrickskowronekdkfz)
• 7bc3091 - send only base url to negotiator (commit by @patrickskowronekdkfz)
• 29a747a - use correct default values for options component (commit by @torbrenner)
• aab5534 - don't add key to top of ast (commit by @torbrenner)
• db25167 - change description of negotiator url (commit by @patrickskowronekdkfz)
• dce30cf - renamed NegotiatorOptions (commit by @patrickskowronekdkfz)
• d1901da - measure write protection (commit by @patrickskowronekdkfz)
• 5c3e15f - use proper cql query and if a accumulatedValues has no values not display it (commit by @patrickskowronekdkfz)
• 77001f0 - fix logic for multiple types in query (commit by @patrickskowronekdkfz)
• 5532871 - wrong group defintion of C45-49 (commit by @patrickskowronekdkfz)
• 0a5e4b3 - escape regex for diagnosis diagram (commit by @patrickskowronekdkfz)
• 73085ee - use InfoLink type (commit by @patrickskowronekdkfz)
• 7f4b0af - search in all branches for empty queries (commit by @patrickskowronekdkfz)
• 43c5ad3 - show error to user if one of the search bars is empty (commit by @timakro)
• a413e92 - fix typescript error in DataTreeElement.svelte (commit by @timakro)
• baf6c1a - dktk icd subgroups (commit by @patrickskowronekdkfz)
• b7fea4e - clear search bar input when it loses focus (commit by @timakro)
• 3f721e9 - remove nodeType from catalogue types (commit by @timakro)
• d1002a3 - allow empty search (commit by @timakro)
• d1de025 - fix error when deleting one of the search bars (only applies when there is more than one) (commit by @timakro)
• 699a773 - indicate sorting in table headers using arrows (commit by @timakro)

⚡ Performance Improvements

• 9e61d6b - start catalogue search after only with 3rd entered character *(commit by @t...

v0.4.3

✨ New Features

• af21b67 - activate negotiate button (commit by @torbrenner)
• 95741dc - implement bbmri negotiator (commit by @patrickskowronekdkfz)
• 070a2c4 - seperate bbmri and ccp data requests (commit by @patrickskowronekdkfz)

🐛 Bug Fixes

• ac0afa9 - convert backgroundcolor from string to string array (commit by @patrickskowronekdkfz)
• 6f7f45f - fix passing group range to charts (commit by @patrickskowronekdkfz)
• 7357aef - info and search button with empty second empty query input (commit by @patrickskowronekdkfz)
• 68ebbac - added missing date option in fieldType enum of catalogue schema (commit by @thkoehler11)
• 3f7e830 - changed to datarequestsstore (commit by @patrickskowronekdkfz)
• bc1db18 - infobutton interface (commit by @patrickskowronekdkfz)

🔧 Chores

• 7e3a3d9 - activate project-manager in demo environment (commit by @torbrenner)
• a2c70cf - added dktk-datashield-test (commit by @patrickskowronekdkfz)
• 54e35da - remove negotiate button (commit by @patrickskowronekdkfz)
• ef908ed - formating (commit by @patrickskowronekdkfz)
• 755e662 - remove unsed definition (commit by @patrickskowronekdkfz)

v0.4.2

✨ New Features

• a39a1d3 - parameters: change attributes to parameters (commit by @MatsJohansen87)
• ed1823a - ccp summary bar: add specimen aggregation (commit by @MatsJohansen87)
• 3ab2ebb - api: add api to set query the whole store (commit by @MatsJohansen87)
• 59de8e7 - demo: add demo function to fragment development, (commit by @MatsJohansen87)

🐛 Bug Fixes

• d53823d - options: fix fetch path error (commit by @MatsJohansen87)
• ef9ff0d - ast: system is passed to query and ast (commit by @MatsJohansen87)
• c0aad2d - types: add function definition to datapasser interface (commit by @MatsJohansen87)
• 7198485 - use direct output of blaze (commit by @patrickskowronekdkfz)

🔧 Chores

• aa05e66 - testing: remove test functions (commit by @MatsJohansen87)

v0.3.1

✨ New Features

• ec50f0b - negotiate: add base64 query to request (commit by @MatsJohansen87)
• 7a12896 - WIP - project manager connection (commit by @torbrenner)
• 2a4fe75 - send CQL to project manager (commit by @torbrenner)
• a8a815b - env: set ports (commit by @MatsJohansen87)
• 959fdb1 - environment: add environment variables to the project (commit by @MatsJohansen87)
• 80f1a60 - project manager: add jump to project manager (commit by @MatsJohansen87)
• 8dfd37b - WIP: project manager: add refresh token support (commit by @MatsJohansen87)
• e32ecba - authentication wip: get refresh token (commit by @MatsJohansen87)
• 39a4258 - wip authentication: refactor authentication (commit by @MatsJohansen87)
• e1e88d7 - wip negotiate: get auth from project manager (commit by @MatsJohansen87)
• 3d77029 - wip negotiate: get correct tokens (commit by @MatsJohansen87)
• 8fd8b3a - auth: add proper token refreshing via forward proxy (commit by @MatsJohansen87)
• 5275d03 - negotiate: add schema for options and move from demo to dev (commit by @MatsJohansen87)
• 353533e - catalogues: add staging catalogue (commit by @MatsJohansen87)
• 02a3502 - negotiate: add config to change negotiation service (commit by @MatsJohansen87)
• a5c614b - date picker: add date picker component (commit by @MatsJohansen87)

🐛 Bug Fixes

• 51b1ed7 - make requests work (commit by @torbrenner)
• 1b0f87d - get site from siteCollectionMap (commit by @torbrenner)
• eccb36a - send collectionId to project manager (commit by @torbrenner)
• 3e1e5ab - send return url only with params if user defined criteria (commit by @torbrenner)
• 945fb4c - auth: remove negotiator authentiation from frontend code (commit by @MatsJohansen87)
• 42ce353 - use proper options file for production (commit by @torbrenner)

♻️ Refactors

• bfceafa - adjust deployment configuration (commit by @torbrenner)
• 7fdcc1a - add project-manager.env to gitignore (commit by @torbrenner)

v0.3.0

✨ New Features

• 9c3f010 - added dktk project based search (commit by @patrickskowronekdkfz)
• f57dedb - result_summary: add samples to summary (commit by @1000daysofcode)
• d2c0bd3 - options: move catalog response key map (commit by @MatsJohansen87)
• 640fb99 - options: update prod and demo options to new schema (commit by @MatsJohansen87)

🐛 Bug Fixes

• 7bdcaa9 - regex of age, will filter everything between 10 - 120 (commit by @patrickskowronekdkfz)
• c933ec7 - allow age diagram 0-9 (commit by @patrickskowronekdkfz)
• 2022af2 - typo in url (commit by @patrickskowronekdkfz)
• e8ce240 - SingleSelectComponent: remove redundant 'Add All' (commit by @1000daysofcode)

♻️ Refactors

• 0ffce2b - AddAll: change text to German for CCP (commit by @1000daysofcode)

🔧 Chores

• d8c7c6f - logs: remove logs (commit by @MatsJohansen87)

v0.2.2

🐛 Bug Fixes

• dd9e18c - search bar multiple: fix bug which crashes the catalogue (commit by @MatsJohansen87)

v0.2.1

✨ New Features

• f77caf4 - footer: add faq link (commit by @MatsJohansen87)

🐛 Bug Fixes

• 2d041af - backend: correct production backends (commit by @MatsJohansen87)
• ef1f023 - options: correct ccp backend config (commit by @MatsJohansen87)
• 8644d89 - version: revert version upgrade (commit by @MatsJohansen87)
• 4f456a2 - footer: fix links (commit by @MatsJohansen87)
• 62f62d3 - options: add hint text on staging and develop (commit by @MatsJohansen87)
• 75491a6 - footer: remove whitespace in link (commit by @MatsJohansen87)