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saliweb now requires comma-separated chains
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benmwebb committed Aug 22, 2024
1 parent 26c04d3 commit 88a776d
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4 changes: 2 additions & 2 deletions frontend/multifoxs/templates/help.html
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Expand Up @@ -11,8 +11,8 @@ <h3><font color='#B22222'>Input Fields</font></h3>
<li><a name="protein"></a><b>Input protein:</b> it is possible to
specify the PDB code of the input protein <b>or</b> upload a file in PDB
format. Each code is a four character PDB ID, followed by a colon and
a list of chain IDs, e.g. 2pka:AB. If no chain IDs are given, all the
chains of the PDB file are used.
a comma-separated list of chain IDs, e.g. 2pka:A,B. If no chain IDs are given,
all the chains of the PDB file are used.

<p><b><font color="red"> IMPORTANT! </font> Your input protein should contain all the atoms with proper geometry (bond length, bond angles, no steric clashes).</b> Missing fragments can be filled in using <a href="https://salilab.org/modeller/"> MODELLER </a> or the
<a href="https://modbase.compbio.ucsf.edu/allosmod-foxs/"> AllosMod-FoXS webserver</a>.</p>
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2 changes: 1 addition & 1 deletion frontend/multifoxs/templates/index.html
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Expand Up @@ -13,7 +13,7 @@
</table>
<table border="0" cellpadding="5" cellspacing="0" width="99%">
<tr>
<td align="left"><a href="{{ url_for("help", _anchor="protein") }}"><b>Input protein</b></a></td> <td align="left"><input type="text" name="pdbcode" size="10" maxlength="10" /> (PDB:chainId e.g. 2kai:AB)</td> <td align="left"><b>or</b> upload file: <input type="file" name="pdbfile" size="10" /></td>
<td align="left"><a href="{{ url_for("help", _anchor="protein") }}"><b>Input protein</b></a></td> <td align="left"><input type="text" name="pdbcode" size="10" maxlength="10" /> (PDB:chainId e.g. 2kai:A,B)</td> <td align="left"><b>or</b> upload file: <input type="file" name="pdbfile" size="10" /></td>
</tr>
<tr><td align="left"><a href="{{ url_for("help", _anchor="flexres") }}"><b>Flexible residues</b></a></td> <td align="left"><input type="file" name="hingefile" size="10" /></td>
</tr>
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