Merge pull request NVIDIA-AI-Blueprints#32 from ruromero/fix-build

chore: force use of bash

Dockerfile

@@ -35,11 +35,11 @@ ENV PATH=/opt/conda/bin:$PATH
 
 # Install Mamba, a faster alternative to conda, within the base environment
 RUN --mount=type=cache,id=conda_pkgs,target=/opt/conda/pkgs,sharing=locked \
-    conda install -y mamba -n base -c conda-forge
+    bash -c "conda install -y mamba -n base -c conda-forge"
 
 # Create base environment
 RUN --mount=type=cache,id=conda_pkgs,target=/opt/conda/pkgs,sharing=locked \
-    conda create -y --name morpheus-vuln-analysis
+    bash -c "conda create -y --name morpheus-vuln-analysis"
 
 # Activate the environment (make it default for subsequent commands)
 RUN echo "source activate morpheus-vuln-analysis" >> ~/.bashrc
@@ -48,15 +48,15 @@ RUN echo "source activate morpheus-vuln-analysis" >> ~/.bashrc
 SHELL ["/bin/bash", "-c"]
 
 # Add conda channels required for the Morpheus dependencies
-RUN source activate morpheus-vuln-analysis \
+RUN bash -c "source activate morpheus-vuln-analysis \
     && conda config --env --add channels conda-forge \
     && conda config --env --add channels nvidia \
     && conda config --env --add channels rapidsai \
-    && conda config --env --add channels pytorch
+    && conda config --env --add channels pytorch"
 
 RUN --mount=type=cache,id=conda_pkgs,target=/opt/conda/pkgs,sharing=locked \
-    source activate morpheus-vuln-analysis &&\
-    mamba install -y -c conda-forge tini=0.19
+    bash -c "source activate morpheus-vuln-analysis &&\
+    mamba install -y -c conda-forge tini=0.19"
 
 WORKDIR /workspace/
 
@@ -69,8 +69,8 @@ SHELL ["/bin/bash", "-c"]
 # Install dependencies
 RUN --mount=type=cache,id=pip_cache,target=/root/.cache/pip,sharing=locked \
     --mount=type=cache,id=conda_pkgs,target=/opt/conda/pkgs,sharing=locked \
-    source activate morpheus-vuln-analysis &&\
-    mamba env update -f ./requirements.yaml
+    bash -c "source activate morpheus-vuln-analysis &&\
+    mamba env update -f ./requirements.yaml"
 
 # If any changes have been made from the base image, recopy the sources
 COPY . /workspace/
@@ -88,13 +88,13 @@ FROM base as runtime
 
 RUN --mount=type=cache,id=pip_cache,target=/root/.cache/pip,sharing=locked \
     --mount=type=cache,id=conda_pkgs,target=/opt/conda/pkgs,sharing=locked \
-    source activate morpheus-vuln-analysis &&\
+    bash -c "source activate morpheus-vuln-analysis &&\
     mamba install -y -c conda-forge \
         ipywidgets \
         jupyter_contrib_nbextensions \
         # notebook v7 is incompatible with jupyter_contrib_nbextensions
         notebook=6 &&\
     jupyter contrib nbextension install --user &&\
-    pip install jupyterlab_nvdashboard==0.9
+    pip install jupyterlab_nvdashboard==0.9"
 
 CMD ["jupyter-lab", "--no-browser", "--allow-root", "--ip='*'", "--port=8000", "--NotebookApp.token=''", "--NotebookApp.password=''"]