Update Copernicus template to 7.9 #665
Workflow file for this run
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| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | |
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
| # | |
| # NOTE: This workflow is overkill for most R packages and | |
| # check-standard.yaml is likely a better choice. | |
| # usethis::use_github_action("check-standard") will install it. | |
| on: | |
| push: | |
| branches: [main, master] | |
| paths-ignore: | |
| - '_pkgdown.yml' | |
| - 'pkgdown/**' | |
| - '.github/workflows/pkgdown.yaml' | |
| pull_request: | |
| branches: [main, master] | |
| paths-ignore: | |
| - '_pkgdown.yml' | |
| - 'pkgdown/**' | |
| - '.github/workflows/pkgdown.yaml' | |
| workflow_dispatch: | |
| name: R-CMD-check | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) [Pandoc ${{matrix.config.pandoc}}] | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| # testing R release with last shipped pandoc version in RStudio IDE and new pandoc | |
| - {os: windows-latest, pandoc: '3.1.9', r: 'release'} | |
| - {os: macOS-latest, pandoc: '3.1.9', r: 'release'} | |
| - {os: ubuntu-latest, pandoc: 'devel', r: 'release'} | |
| # testing older pandoc versions | |
| - {os: ubuntu-latest, pandoc: '3.1.7', r: 'release'} # special citeproc change | |
| - {os: ubuntu-latest, pandoc: '2.19.2', r: 'release'} | |
| - {os: ubuntu-latest, pandoc: '2.18', r: 'release'} | |
| - {os: ubuntu-latest, pandoc: '2.17.1.1', r: 'release'} | |
| - {os: ubuntu-latest, pandoc: '2.16.2', r: 'release'} | |
| - {os: ubuntu-latest, pandoc: '2.14.2', r: 'release'} | |
| - {os: ubuntu-latest, pandoc: '2.11.4', r: 'release'} | |
| - {os: ubuntu-latest, pandoc: '2.7.3', r: 'release'} | |
| - {os: ubuntu-latest, pandoc: '2.5', r: 'release'} | |
| # testing other R versions | |
| - {os: ubuntu-latest, pandoc: '2.11.4', r: 'devel', http-user-agent: 'release'} | |
| - {os: ubuntu-latest, pandoc: '2.11.4', r: 'oldrel-1'} | |
| - {os: ubuntu-latest, pandoc: '2.11.4', r: 'oldrel-2'} | |
| - {os: ubuntu-latest, pandoc: '2.11.4', r: 'oldrel-3'} | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| R_KEEP_PKG_SOURCE: yes | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| http-user-agent: ${{ matrix.config.http-user-agent }} | |
| use-public-rspm: true | |
| - name: change temp dir | |
| if: runner.os == 'Windows' | |
| run: echo "TMPDIR=${{ runner.temp }}" >> $GITHUB_ENV | |
| shell: bash | |
| - name: Add some R options for later steps | |
| run: | | |
| cat("\noptions(tinytex.verbose = TRUE)\n", file = "~/.Rprofile", append = TRUE) | |
| cat(readLines("~/.Rprofile"), sep = "\n") | |
| shell: Rscript {0} | |
| - uses: r-lib/actions/setup-tinytex@v2 | |
| env: | |
| # install full prebuilt version | |
| TINYTEX_INSTALLER: TinyTeX | |
| - name: preinstall some CTAN packages | |
| run: | | |
| tlmgr update --self | |
| tlmgr install achemso adobemapping ae algorithmicx algorithms amscls apacite arphic babel-english babel-french beamer biblatex bookmark caption carlisle changepage charter chemgreek cite cjk cjkpunct cns colortbl courier crop ctablestack ctex datetime dblfloatfix draftwatermark endfloat endnotes enumitem environ epsf epstopdf eso-pic esvect etex-pkg everyhook everypage extsizes fancyhdr fandol floatflt fmtcount fontaxes fonts-tlwg footmisc forarray fp fpl garuda-c90 grfext hyphen-french hyphenat ifmtarg jknapltx kastrup lastpage latex-base-dev lettrine lineno listings logreq luatexbase luatexja ly1 marginnote marvosym mathpazo mathspec mdframed mhchem microtype minifp mnras morefloats moreverb mptopdf multirow needspace newfloat newtx norasi-c90 oberdiek palatino parskip pdfsync pgf placeins platex platex-tools preprint psfrag psnfss ptex ptex-base ptex-fonts ragged2e rsfs seqsplit setspace sidecap soul stix sttools subfigure svn-prov symbol tabto-ltx tcolorbox tex-gyre textcase titlesec totcount translator trimspaces ttfutils ucs uhc ulem units uplatex upquote uptex uptex-base uptex-fonts varwidth vruler wadalab wrapfig xcjk2uni xecjk xifthen xpinyin xstring xypic zapfchan zhmetrics zhmetrics-uptex zhnumber zref | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: any::rcmdcheck | |
| needs: check | |
| - name: Remove default installed Pandoc | |
| if: runner.os == 'Linux' | |
| run: sudo dpkg -r pandoc | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| if: matrix.config.pandoc != 'devel' | |
| with: | |
| pandoc-version: ${{ matrix.config.pandoc }} | |
| - uses: cderv/actions/setup-pandoc-nightly@nightly-pandoc | |
| if: matrix.config.pandoc == 'devel' | |
| - name: Install system dependencies | |
| if: runner.os == 'Linux' | |
| run: sudo apt-get install -y ghostscript | |
| - name: TeX Info | |
| run: | | |
| tinytex::tlmgr("--version") | |
| tinytex::tl_pkgs() | |
| shell: Rscript {0} | |
| - uses: r-lib/actions/check-r-package@v2 | |
| with: | |
| upload-snapshots: true | |
| - name: Test coverage | |
| if: success() && runner.os == 'Linux' && matrix.config.r == 'release' && matrix.config.pandoc == '2.19.2' | |
| run: | | |
| pak::pkg_install('covr') | |
| covr::codecov() | |
| shell: Rscript {0} |