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Sure, I can help you with that. Please provide me with the git diff r…
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…esponse and I will write a concise, short, and understandable commit message for you. Remember to sort the changes in the commit message by importance, from most important to least important.
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icaoberg committed Feb 8, 2024
1 parent bc84de2 commit e4768fe
Showing 1 changed file with 2 additions and 23 deletions.
25 changes: 2 additions & 23 deletions 0.69-9/test.sh
Original file line number Diff line number Diff line change
Expand Up @@ -3,27 +3,6 @@
set -x

shopt -s expand_aliases
alias circos='singularity exec singularity-circos-0.69-9.sif circos'

if [ ! -d circos-tutorials-0.67 ]; then
wget -nc http://circos.ca/distribution/circos-tutorials-current.tgz
tar -xvf circos-tutorials-current.tgz && rm -fv circos-tutorials-current.tgz
fi

alias circos='singularity exec "$DIRECTORY"/singularity-circos-0.69-9.sif circos'

DIRECTORY=$(pwd)
cd circos-tutorials-0.67/tutorials/2

for I in 2 3 4 5 6 7 8 9 10;
do
cd $I
circos -conf circos.conf

EXIT_CODE=0
if [ ! -f circos.png ]; then
EXIT_CODE=1
fi
cd ..
done

exit $EXIT_CODE
circos --help

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