Code

Extra large kmers#17

Code

Merged

karel-brinda merged 11 commits intomainprophyle/prophasm2:mainfrom extra_large_kmersprophyle/prophasm2:extra_large_kmersCopy head branch name to clipboardSep 27, 2024

+1,153-113

Commits

Commits on Mar 21, 2024

• Added support for k-mers up to 128.

  OndrejSladky

  committed
  f35e399

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• Fixed unittests on linux.

  OndrejSladky

  committed
  23638a8

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• Minor cleanups.

  OndrejSladky

  committed
  4c095bb

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• Removed duplicit definition of __LITTLE_ENDIAN__

  OndrejSladky

  committed
  fd05155

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• Verifying for k up to 128.

  OndrejSladky

  committed
  a6d8618

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• 1s compilation speedup

  OndrejSladky

  committed
  0df8dd8

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• Another 1s compilation speedup.

  OndrejSladky

  committed
  c301493

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• Unittests for large reverse complements.

  OndrejSladky

  committed
  81c710b

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Commits on Apr 25, 2024

• Fixed error in reverse complements for extra large k-mers.

  OndrejSladky

  committed
  afa9915

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Commits on Apr 26, 2024

• Merge branch 'main' into extra_large_kmers

  OndrejSladky

  committed
  13b41e9

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• README: sizes up to 128.

  OndrejSladky

  committed
  26c030e

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