Merge branch 'main' into 16-adding-tests

.gitignore

@@ -160,3 +160,7 @@ cython_debug/
 #.idea/
 .datamander
 .DS_Store
+
+
+# Visual studio code
+.vscode

Makefile

@@ -5,3 +5,7 @@ pip-compile:
 install:
 	python -m pip install -e . -r requirements.txt -r requirements-test.txt
 	pre-commit install
+
+check-wip:
+	pre-commit run --all-files
+    python -m pytest tests

pyproject.toml

@@ -18,6 +18,7 @@ dependencies = [
   "rich",
   "scikit-learn",
   "srsly",
+  "fastapi",
 ]
 
 [project.optional-dependencies]

requirements-test.txt

@@ -6,6 +6,13 @@
 #
 altair==5.3.0
     # via mandr (pyproject.toml)
+annotated-types==0.7.0
+    # via pydantic
+anyio==4.4.0
+    # via
+    #   httpx
+    #   starlette
+    #   watchfiles
 attrs==23.2.0
     # via
     #   jsonschema
@@ -14,34 +21,65 @@ blinker==1.8.2
     # via flask
 catalogue==2.0.10
     # via srsly
+certifi==2024.7.4
+    # via
+    #   httpcore
+    #   httpx
 cfgv==3.4.0
     # via pre-commit
 click==8.1.7
-    # via flask
+    # via
+    #   flask
+    #   typer
+    #   uvicorn
 coverage[toml]==7.5.4
     # via pytest-cov
 diskcache==5.6.3
     # via mandr (pyproject.toml)
 distlib==0.3.8
     # via virtualenv
+dnspython==2.6.1
+    # via email-validator
+email-validator==2.2.0
+    # via fastapi
+fastapi==0.111.0
+    # via mandr (pyproject.toml)
+fastapi-cli==0.0.4
+    # via fastapi
 filelock==3.15.4
     # via virtualenv
 flask==3.0.3
     # via mandr (pyproject.toml)
-identify==2.5.36
+h11==0.14.0
+    # via
+    #   httpcore
+    #   uvicorn
+httpcore==1.0.5
+    # via httpx
+httptools==0.6.1
+    # via uvicorn
+httpx==0.27.0
+    # via fastapi
+identify==2.6.0
     # via pre-commit
+idna==3.7
+    # via
+    #   anyio
+    #   email-validator
+    #   httpx
 iniconfig==2.0.0
     # via pytest
 itsdangerous==2.2.0
     # via flask
 jinja2==3.1.4
     # via
     #   altair
+    #   fastapi
     #   flask
     #   mandr (pyproject.toml)
 joblib==1.4.2
     # via scikit-learn
-jsonschema==4.22.0
+jsonschema==4.23.0
     # via altair
 jsonschema-specifications==2023.12.1
     # via jsonschema
@@ -63,6 +101,8 @@ numpy==2.0.0
     #   pandas
     #   scikit-learn
     #   scipy
+orjson==3.10.6
+    # via fastapi
 packaging==24.1
     # via
     #   altair
@@ -77,6 +117,10 @@ pluggy==1.5.0
     # via pytest
 pre-commit==3.7.1
     # via mandr (pyproject.toml)
+pydantic==2.8.2
+    # via fastapi
+pydantic-core==2.20.1
+    # via pydantic
 pygments==2.18.0
     # via rich
 pytest==8.2.2
@@ -87,37 +131,71 @@ pytest-cov==5.0.0
     # via mandr (pyproject.toml)
 python-dateutil==2.9.0.post0
     # via pandas
+python-dotenv==1.0.1
+    # via uvicorn
+python-multipart==0.0.9
+    # via fastapi
 pytz==2024.1
     # via pandas
 pyyaml==6.0.1
-    # via pre-commit
+    # via
+    #   pre-commit
+    #   uvicorn
 referencing==0.35.1
     # via
     #   jsonschema
     #   jsonschema-specifications
 rich==13.7.1
-    # via mandr (pyproject.toml)
-rpds-py==0.18.1
+    # via
+    #   mandr (pyproject.toml)
+    #   typer
+rpds-py==0.19.0
     # via
     #   jsonschema
     #   referencing
-ruff==0.5.0
+ruff==0.5.1
     # via mandr (pyproject.toml)
 scikit-learn==1.5.1
     # via mandr (pyproject.toml)
 scipy==1.14.0
     # via scikit-learn
+shellingham==1.5.4
+    # via typer
 six==1.16.0
     # via python-dateutil
+sniffio==1.3.1
+    # via
+    #   anyio
+    #   httpx
 srsly==2.4.8
     # via mandr (pyproject.toml)
+starlette==0.37.2
+    # via fastapi
 threadpoolctl==3.5.0
     # via scikit-learn
 toolz==0.12.1
     # via altair
+typer==0.12.3
+    # via fastapi-cli
+typing-extensions==4.12.2
+    # via
+    #   fastapi
+    #   pydantic
+    #   pydantic-core
+    #   typer
 tzdata==2024.1
     # via pandas
+ujson==5.10.0
+    # via fastapi
+uvicorn[standard]==0.30.1
+    # via fastapi
+uvloop==0.19.0
+    # via uvicorn
 virtualenv==20.26.3
     # via pre-commit
+watchfiles==0.22.0
+    # via uvicorn
+websockets==12.0
+    # via uvicorn
 werkzeug==3.0.3
     # via flask

requirements.txt

@@ -6,6 +6,13 @@
 #
 altair==5.3.0
     # via mandr (pyproject.toml)
+annotated-types==0.7.0
+    # via pydantic
+anyio==4.4.0
+    # via
+    #   httpx
+    #   starlette
+    #   watchfiles
 attrs==23.2.0
     # via
     #   jsonschema
@@ -14,22 +21,53 @@ blinker==1.8.2
     # via flask
 catalogue==2.0.10
     # via srsly
+certifi==2024.7.4
+    # via
+    #   httpcore
+    #   httpx
 click==8.1.7
-    # via flask
+    # via
+    #   flask
+    #   typer
+    #   uvicorn
 diskcache==5.6.3
     # via mandr (pyproject.toml)
+dnspython==2.6.1
+    # via email-validator
+email-validator==2.2.0
+    # via fastapi
+fastapi==0.111.0
+    # via mandr (pyproject.toml)
+fastapi-cli==0.0.4
+    # via fastapi
 flask==3.0.3
     # via mandr (pyproject.toml)
+h11==0.14.0
+    # via
+    #   httpcore
+    #   uvicorn
+httpcore==1.0.5
+    # via httpx
+httptools==0.6.1
+    # via uvicorn
+httpx==0.27.0
+    # via fastapi
+idna==3.7
+    # via
+    #   anyio
+    #   email-validator
+    #   httpx
 itsdangerous==2.2.0
     # via flask
 jinja2==3.1.4
     # via
     #   altair
+    #   fastapi
     #   flask
     #   mandr (pyproject.toml)
 joblib==1.4.2
     # via scikit-learn
-jsonschema==4.22.0
+jsonschema==4.23.0
     # via altair
 jsonschema-specifications==2023.12.1
     # via jsonschema
@@ -49,41 +87,81 @@ numpy==2.0.0
     #   pandas
     #   scikit-learn
     #   scipy
+orjson==3.10.6
+    # via fastapi
 packaging==24.1
     # via altair
 pandas==2.2.2
     # via
     #   altair
     #   mandr (pyproject.toml)
+pydantic==2.8.2
+    # via fastapi
+pydantic-core==2.20.1
+    # via pydantic
 pygments==2.18.0
     # via rich
 python-dateutil==2.9.0.post0
     # via pandas
+python-dotenv==1.0.1
+    # via uvicorn
+python-multipart==0.0.9
+    # via fastapi
 pytz==2024.1
     # via pandas
+pyyaml==6.0.1
+    # via uvicorn
 referencing==0.35.1
     # via
     #   jsonschema
     #   jsonschema-specifications
 rich==13.7.1
-    # via mandr (pyproject.toml)
-rpds-py==0.18.1
+    # via
+    #   mandr (pyproject.toml)
+    #   typer
+rpds-py==0.19.0
     # via
     #   jsonschema
     #   referencing
 scikit-learn==1.5.1
     # via mandr (pyproject.toml)
 scipy==1.14.0
     # via scikit-learn
+shellingham==1.5.4
+    # via typer
 six==1.16.0
     # via python-dateutil
+sniffio==1.3.1
+    # via
+    #   anyio
+    #   httpx
 srsly==2.4.8
     # via mandr (pyproject.toml)
+starlette==0.37.2
+    # via fastapi
 threadpoolctl==3.5.0
     # via scikit-learn
 toolz==0.12.1
     # via altair
+typer==0.12.3
+    # via fastapi-cli
+typing-extensions==4.12.2
+    # via
+    #   fastapi
+    #   pydantic
+    #   pydantic-core
+    #   typer
 tzdata==2024.1
     # via pandas
+ujson==5.10.0
+    # via fastapi
+uvicorn[standard]==0.30.1
+    # via fastapi
+uvloop==0.19.0
+    # via uvicorn
+watchfiles==0.22.0
+    # via uvicorn
+websockets==12.0
+    # via uvicorn
 werkzeug==3.0.3
     # via flask

src/mandr/__init__.py

@@ -1,5 +1,33 @@
-"""Povide the InfoMander class for managing information in a data science project."""
+"""Provide the InfoMander class for managing information in a data science project."""
+
+import logging
+
+import rich.logging
 
 from .infomander import InfoMander
 
 __all__ = ["InfoMander"]
+
+
+class Handler(rich.logging.RichHandler):
+    """A logging handler that renders output with Rich."""
+
+    def get_level_text(self, record: rich.logging.LogRecord) -> rich.logging.Text:
+        """Get the logger name and levelname from the record."""
+        levelname = record.levelname
+        name = record.name
+        txt = f"<Logger {name} ({levelname})>"
+
+        return rich.logging.Text.styled(
+            txt.ljust(8),
+            f"logging.level.{levelname.lower()}",
+        )
+
+
+formatter = logging.Formatter("%(message)s")
+handler = Handler(markup=True)
+handler.setFormatter(formatter)
+
+logger = logging.getLogger(__name__)
+logger.addHandler(handler)
+logger.setLevel(logging.INFO)