update of test data

poseidon-framework · Oct 31, 2024 · 4502548 · 4502548
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Showing 3 changed files with 9 additions and 9 deletions.
diff --git a/test/PoseidonGoldenTests/GoldenTestCheckSumFile.txt b/test/PoseidonGoldenTests/GoldenTestCheckSumFile.txt
@@ -118,7 +118,7 @@ ad7e56177aad0a720f0bde13d47f2ac1 forge forge/ForgePac19/CHANGELOG.md
 9b22cab26cdae87bd79d24c289e48433 forge forge/ForgePac19/ForgePac19.fam
 b7b649620cd37bd4a6d6f0f31c1c56da forge forge/ForgePac19/ForgePac19.janno
 b36b3ca509c235d0f15571c96195e801 forge forge/ForgePac20/POSEIDON.yml
-f0f374dea59b7a8518a4c6cc37fe38a1 forge forge/ForgePac20/ForgePac20.janno
+e375863bca9e4a91c9855396abde31c7 forge forge/ForgePac20/ForgePac20.janno
 d4a05cfef045648238a94a9d621cf667 chronicle chronicle/chronicle1.yml
 b43da4d5734371c0648553120f812466 timetravel timetravel/Lamnidis_2018-1.0.0/POSEIDON.yml
 8d57ce1a1ab28c0d8a5f391dd790a59c timetravel timetravel/Lamnidis_2018-1.0.1/POSEIDON.yml

diff --git a/test/PoseidonGoldenTests/GoldenTestData/chronicle/chronicle2.yml b/test/PoseidonGoldenTests/GoldenTestData/chronicle/chronicle2.yml
@@ -5,25 +5,25 @@ lastModified: 2024-10-31
 packages:
 - title: Lamnidis_2018
   version: 1.0.0
-  commit: 279efe2c69d77d487d54731866763fbaaf82d51e
+  commit: 0c11f86fe594dff1e8dc9b9c4c8568e8318f01bb
   path: Lamnidis_2018
 - title: Lamnidis_2018
   version: 1.0.1
-  commit: 279efe2c69d77d487d54731866763fbaaf82d51e
+  commit: 0c11f86fe594dff1e8dc9b9c4c8568e8318f01bb
   path: Lamnidis_2018_newVersion
 - title: Schiffels
   version: 1.1.1
-  commit: 3be51b1e18a536f1c4aa21e263546b5cedf20697
+  commit: c31c1842f859c42a35713c227c0ba589689d31aa
   path: Schiffels
 - title: Schiffels_2016
   version: 1.0.1
-  commit: 279efe2c69d77d487d54731866763fbaaf82d51e
+  commit: 0c11f86fe594dff1e8dc9b9c4c8568e8318f01bb
   path: Schiffels_2016
 - title: Schmid_2028
   version: 1.0.0
-  commit: 279efe2c69d77d487d54731866763fbaaf82d51e
+  commit: 0c11f86fe594dff1e8dc9b9c4c8568e8318f01bb
   path: Schmid_2028
 - title: Wang_2020
   version: 0.1.0
-  commit: 279efe2c69d77d487d54731866763fbaaf82d51e
+  commit: 0c11f86fe594dff1e8dc9b9c4c8568e8318f01bb
   path: Wang_2020
diff --git a/test/PoseidonGoldenTests/GoldenTestData/forge/ForgePac20/ForgePac20.janno b/test/PoseidonGoldenTests/GoldenTestData/forge/ForgePac20/ForgePac20.janno
@@ -1,3 +1,3 @@
 Poseidon_ID	Genetic_Sex	Group_Name	Alternative_IDs	Relation_To	Relation_Degree	Relation_Type	Relation_Note	Collection_ID	Country	Country_ISO	Location	Site	Latitude	Longitude	Date_Type	Date_C14_Labnr	Date_C14_Uncal_BP	Date_C14_Uncal_BP_Err	Date_BC_AD_Start	Date_BC_AD_Median	Date_BC_AD_Stop	Date_Note	MT_Haplogroup	Y_Haplogroup	Source_Tissue	Nr_Libraries	Library_Names	Capture_Type	UDG	Library_Built	Genotype_Ploidy	Data_Preparation_Pipeline_URL	Endogenous	Nr_SNPs	Coverage_on_Target_SNPs	Damage	Contamination	Contamination_Err	Contamination_Meas	Contamination_Note	Genetic_Source_Accession_IDs	Primary_Contact	Publication	Note	Keywords
-XXX001	F	POP1	n/a	n/a	n/a	n/a	n/a	n/a	testà	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	9	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a
-XXX002	F	POP2	n/a	n/a	n/a	n/a	n/a	n/a	test	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	9	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a
+XXX001	F	POP1	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	testà	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	9	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a
+XXX002	F	POP2	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	MAMS-47224	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	9	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a