Issue #15: Add a CTAKES implementation

Use the current URL for downloading HPO
phenotips · May 21, 2017 · 0eacefc · 0eacefc
1 parent aae4f6a
commit 0eacefc
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/...es-service/src/main/java/org/phenotips/textanalysis/internal/CTakesAnnotationService.java b/...es-service/src/main/java/org/phenotips/textanalysis/internal/CTakesAnnotationService.java
@@ -152,7 +152,8 @@ public Map<String, Object> reindex()
     {
         synchronized (CTakesAnnotationService.class) {
             try {
-                URL url = new URL("https://compbio.charite.de/jenkins/job/hpo/lastStableBuild/artifact/hp/hp.owl");
+                URL url =
+                    new URL("https://raw.githubusercontent.com/obophenotype/human-phenotype-ontology/master/hp.owl");
                 Path temp = Files.createTempFile("hpoLoad", ".owl");
                 FileUtils.copyURLToFile(url, temp.toFile());
                 CTakesLoader loader = new CTakesLoader(temp.toFile().toString(), this.indexDirectory);