Merge pull request #105 from pharmaverse/104_cran_feedback_404_links

Closes #104: address cran feedback 404 links

DESCRIPTION

@@ -18,7 +18,7 @@ Description: A set of Study Data Tabulation Model (SDTM) datasets from the Clini
     (2021) <https://www.cdisc.org/system/files/members/standard/foundational/SDTMIG%20v3.4-FINAL_2022-07-21.pdf>.
 Language: en-US
 License: Apache License (>= 2.0)
-URL: https://pharmaverse.github.io/pharmaversesdtm/main/, https://github.com/pharmaverse/pharmaversesdtm
+URL: https://pharmaverse.github.io/pharmaversesdtm, https://github.com/pharmaverse/pharmaversesdtm
 Depends: R (>= 3.5.0)
 Encoding: UTF-8
 LazyData: true

R/data.R

@@ -9,7 +9,7 @@
 #'
 #' An example Adverse Events SDTM dataset with ophthalmology-specific variable `AELAT`
 #'
-#' @source Constructed using `ae` from the `{pharmaversesdtm}` package  # nolint
+#' @source Constructed using `ae` from the `{pharmaversesdtm}` package
 "ae_ophtha"
 
 #' Concomitant Medication
@@ -51,7 +51,7 @@
 #'
 #' An example Exposure SDTM dataset with ophthalmology-specific variables such as `EXLOC` and `EXLAT`
 #'
-#' @source Constructed using `ex` from the `{pharmaversesdtm}` package #nolint
+#' @source Constructed using `ex` from the `{pharmaversesdtm}` package
 "ex_ophtha"
 
 #' Laboratory Measurements
@@ -97,7 +97,7 @@
 #'
 #' An example Questionnaires SDTM dataset with ophthalmology-specific questionnaire of NEI VFQ-25
 #'
-#' @source Constructed using `qs` from the `{pharmaversesdtm}` package #nolint
+#' @source Constructed using `qs` from the `{pharmaversesdtm}` package
 "qs_ophtha"
 
 #' Subject Characteristic for Ophthalmology
@@ -244,75 +244,75 @@
 #'
 #' An example SDTM DM dataset for vaccine studies
 #'
-#' @source \url{https://github.com/pharmaverse/admiralvaccine/blob/main/data/vx_dm.rda}  # nolint
+#' @source Constructed by `{admiralvaccine}` developers
 "dm_vaccine"
 
 #' Vital Signs for Vaccine
 #'
 #' An example SDTM VS dataset for vaccine studies
 #'
-#' @source \url{https://github.com/pharmaverse/admiralvaccine/blob/main/data/vx_vs.rda}  # nolint
+#' @source Constructed by `{admiralvaccine}` developers
 "vs_vaccine"
 
 #' Clinical Events for Vaccine
 #'
 #' An example SDTM CE dataset for vaccine studies
 #'
-#' @source \url{https://github.com/pharmaverse/admiralvaccine/blob/main/data/vx_ce.rda} # nolint
+#' @source Constructed by `{admiralvaccine}` developers
 "ce_vaccine"
 
 #' Exposures for Vaccine
 #'
 #' An example SDTM EX dataset for vaccine studies
 #'
-#' @source \url{https://github.com/pharmaverse/admiralvaccine/blob/main/data/vx_ex.rda}  # nolint
+#' @source Constructed by `{admiralvaccine}` developers
 "ex_vaccine"
 
 #' Immunogenicity Specimen Assessments for Vaccine
 #'
 #' An example SDTM IS for vaccine studies
 #'
-#' @source \url{https://github.com/pharmaverse/admiralvaccine/blob/main/data/vx_is.rda}  # nolint
+#' @source Constructed by `{admiralvaccine}` developers
 "is_vaccine"
 
 #' Findings About Clinical Events for Vaccine
 #'
 #' An example SDTM FACE for vaccine studies
 #'
-#' @source \url{https://github.com/pharmaverse/admiralvaccine/blob/main/data/vx_face.rda}  # nolint
+#' @source Constructed by `{admiralvaccine}` developers
 "face_vaccine"
 
 #' Supplemental Qualifiers for Clinical Events for Vaccine
 #'
 #' An example SDTM SUPPCE for vaccine studies
 #'
-#' @source \url{https://github.com/pharmaverse/admiralvaccine/blob/main/data/vx_suppce.rda}  # nolint
+#' @source Constructed by `{admiralvaccine}` developers
 "suppce_vaccine"
 
 #' Supplemental Qualifiers for Demographics for Vaccine
 #'
 #' An example SDTM SUPPDM dataset for vaccine studies
 #'
-#' @source \url{https://github.com/pharmaverse/admiralvaccine/blob/main/data/vx_suppdm.rda}  # nolint
+#' @source Constructed by `{admiralvaccine}` developers
 "suppdm_vaccine"
 
 #' Supplemental Qualifiers for Exposures for Vaccine
 #'
 #' An example SDTM SUPPEX dataset for vaccine studies
 #'
-#' @source \url{https://github.com/pharmaverse/admiralvaccine/blob/main/data/vx_suppex.rda}  # nolint
+#' @source Constructed by `{admiralvaccine}` developers
 "suppex_vaccine"
 
 #' Supplemental Qualifiers for Findings About for Clinical Events for Vaccine
 #'
 #' An example SDTM SUPPFACE dataset for vaccine studies
 #'
-#' @source \url{https://github.com/pharmaverse/admiralvaccine/blob/main/data/vx_suppface.rda}  # nolint
+#' @source Constructed by `{admiralvaccine}` developers
 "suppface_vaccine"
 
 #' Supplemental Qualifiers for Immunogenicity Specimen Assessments for Vaccine
 #'
 #' An example SDTM SUPPIS dataset for vaccine studies
 #'
-#' @source \url{https://github.com/pharmaverse/admiralvaccine/blob/main/data/vx_suppis.rda}  # nolint
+#' @source Constructed by `{admiralvaccine}` developers
 "suppis_vaccine"

README.md

@@ -26,7 +26,7 @@ remotes::install_github("pharmaverse/pharmaversesdtm", ref = "main")
 
 # Data Sources
 
-Some of the test datasets has been sourced from the [CDISC pilot project](https://github.com/cdisc-org/sdtm-adam-pilot-project), while other datasets have been constructed ad-hoc by the admiral team. Please check the [Reference page](https://pharmaverse.github.io/pharmaversesdtm/cran-release/reference/index.html) for detailed information regarding the source of specific datasets.
+Some of the test datasets has been sourced from the [CDISC pilot project](https://github.com/cdisc-org/sdtm-adam-pilot-project), while other datasets have been constructed ad-hoc by the admiral team. Please check the [Reference page](https://pharmaverse.github.io/pharmaversesdtm/reference/index.html) for detailed information regarding the source of specific datasets.
 
 # Naming Conventions {#naming}
 

cran-comments.md

@@ -0,0 +1,5 @@
+## R CMD check results
+
+0 errors | 0 warnings | 1 note
+
+* This is a new release.