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update tests to tibbles
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@StefanThoma
StefanThoma committed Sep 25, 2024
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180 changes: 3 additions & 177 deletions tests/testthat/_snaps/derive_vars_cat.md
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# derive_vars_cat Test 1: Basic functionality with advs dataset

Code
result
Output
# A tibble: 20 x 5
USUBJID VSTEST AVAL AVALCAT1 AVALCA1N
<chr> <chr> <dbl> <chr> <dbl>
1 01-701-1015 Height 147. <160 2
2 01-701-1023 Height 163. >=160 1
3 01-701-1028 Height 178. >=160 1
4 01-701-1033 Height 175. >=160 1
5 01-701-1034 Height NA <NA> NA
6 01-701-1047 Height NA <NA> NA
7 01-701-1097 Height 169. >=160 1
8 01-701-1111 Height 158. <160 2
9 01-701-1115 Height 182. >=160 1
10 01-701-1118 Height 180. >=160 1
11 01-701-1015 Weight 54.0 <NA> NA
12 01-701-1023 Weight 78.5 <NA> NA
13 01-701-1028 Weight 98.9 <NA> NA
14 01-701-1033 Weight 88.4 <NA> NA
15 01-701-1034 Weight NA <NA> NA
16 01-701-1047 Weight NA <NA> NA
17 01-701-1097 Weight 78.0 <NA> NA
18 01-701-1111 Weight 60.3 <NA> NA
19 01-701-1115 Weight 78.7 <NA> NA
20 01-701-1118 Weight 71.7 <NA> NA

---

Code
result2
Output
# A tibble: 20 x 5
USUBJID VSTEST AVAL AVALCAT1 AVALCA1N
<chr> <chr> <dbl> <chr> <dbl>
1 01-701-1015 Height 147. <160 2
2 01-701-1023 Height 163. >=160 1
3 01-701-1028 Height 178. >=160 1
4 01-701-1033 Height 175. >=160 1
5 01-701-1034 Height NA <NA> NA
6 01-701-1047 Height NA <NA> NA
7 01-701-1097 Height 169. >=160 1
8 01-701-1111 Height 158. <160 2
9 01-701-1115 Height 182. >=160 1
10 01-701-1118 Height 180. >=160 1
11 01-701-1015 Weight 54.0 <NA> NA
12 01-701-1023 Weight 78.5 <NA> NA
13 01-701-1028 Weight 98.9 <NA> NA
14 01-701-1033 Weight 88.4 <NA> NA
15 01-701-1034 Weight NA <NA> NA
16 01-701-1047 Weight NA <NA> NA
17 01-701-1097 Weight 78.0 <NA> NA
18 01-701-1111 Weight 60.3 <NA> NA
19 01-701-1115 Weight 78.7 <NA> NA
20 01-701-1118 Weight 71.7 <NA> NA

# derive_vars_cat Test 2: Forgot to specify by_vars
# derive_vars_cat Test 3: Forgot to specify by_vars

Column(s) in `definition` already exist in `dataset`.
Did you forget to specify `by_vars`,
or are you rerunning your code?

# derive_vars_cat Test 4: Error when definition is not an exprs object
# derive_vars_cat Test 5: Error when definition is not an exprs object

Argument `definition` must be a list of expressions but is a tibble.
i To create a list of expressions use `exprs()`.

# derive_vars_cat Test 6: Correct behavior when no conditions are met

Code
result
Output
# A tibble: 20 x 5
USUBJID VSTEST AVAL AVALCAT1 AVALCA1N
<chr> <chr> <dbl> <chr> <dbl>
1 01-701-1015 Height 147. <NA> NA
2 01-701-1023 Height 163. <NA> NA
3 01-701-1028 Height 178. <NA> NA
4 01-701-1033 Height 175. <NA> NA
5 01-701-1034 Height NA <NA> NA
6 01-701-1047 Height NA <NA> NA
7 01-701-1097 Height 169. <NA> NA
8 01-701-1111 Height 158. <NA> NA
9 01-701-1115 Height 182. <NA> NA
10 01-701-1118 Height 180. <NA> NA
11 01-701-1015 Weight 54.0 <NA> NA
12 01-701-1023 Weight 78.5 <NA> NA
13 01-701-1028 Weight 98.9 <NA> NA
14 01-701-1033 Weight 88.4 <NA> NA
15 01-701-1034 Weight NA <NA> NA
16 01-701-1047 Weight NA <NA> NA
17 01-701-1097 Weight 78.0 <NA> NA
18 01-701-1111 Weight 60.3 <NA> NA
19 01-701-1115 Weight 78.7 <NA> NA
20 01-701-1118 Weight 71.7 <NA> NA

# derive_vars_cat Test 7: Overlapping conditions handled correctly

Code
result
Output
# A tibble: 20 x 5
USUBJID VSTEST AVAL AVALCAT1 AVALCA1N
<chr> <chr> <dbl> <chr> <dbl>
1 01-701-1015 Height 147. <160 3
2 01-701-1023 Height 163. <170 2
3 01-701-1028 Height 178. >=170 1
4 01-701-1033 Height 175. >=170 1
5 01-701-1034 Height NA <NA> NA
6 01-701-1047 Height NA <NA> NA
7 01-701-1097 Height 169. <170 2
8 01-701-1111 Height 158. <160 3
9 01-701-1115 Height 182. >=170 1
10 01-701-1118 Height 180. >=170 1
11 01-701-1015 Weight 54.0 <NA> NA
12 01-701-1023 Weight 78.5 <NA> NA
13 01-701-1028 Weight 98.9 <NA> NA
14 01-701-1033 Weight 88.4 <NA> NA
15 01-701-1034 Weight NA <NA> NA
16 01-701-1047 Weight NA <NA> NA
17 01-701-1097 Weight 78.0 <NA> NA
18 01-701-1111 Weight 60.3 <NA> NA
19 01-701-1115 Weight 78.7 <NA> NA
20 01-701-1118 Weight 71.7 <NA> NA

# derive_vars_cat Test 9: Conditions for multiple VSTESTs (Height and Weight)

Code
result
Output
# A tibble: 20 x 5
USUBJID VSTEST AVAL AVALCAT1 AVALCA1N
<chr> <chr> <dbl> <chr> <dbl>
1 01-701-1015 Height 147. Height < 160 2
2 01-701-1023 Height 163. Height >= 160 1
3 01-701-1028 Height 178. Height >= 160 1
4 01-701-1033 Height 175. Height >= 160 1
5 01-701-1034 Height NA <NA> NA
6 01-701-1047 Height NA <NA> NA
7 01-701-1097 Height 169. Height >= 160 1
8 01-701-1111 Height 158. Height < 160 2
9 01-701-1115 Height 182. Height >= 160 1
10 01-701-1118 Height 180. Height >= 160 1
11 01-701-1015 Weight 54.0 Weight < 66.68 2
12 01-701-1023 Weight 78.5 Weight >= 66.68 1
13 01-701-1028 Weight 98.9 Weight >= 66.68 1
14 01-701-1033 Weight 88.4 Weight >= 66.68 1
15 01-701-1034 Weight NA <NA> NA
16 01-701-1047 Weight NA <NA> NA
17 01-701-1097 Weight 78.0 Weight >= 66.68 1
18 01-701-1111 Weight 60.3 Weight < 66.68 2
19 01-701-1115 Weight 78.7 Weight >= 66.68 1
20 01-701-1118 Weight 71.7 Weight >= 66.68 1

# derive_vars_cat Test 10: Adding an extra variable (flag) to the dataset

Code
result
Output
# A tibble: 20 x 6
USUBJID VSTEST AVAL AVALCAT1 AVALCA1N extra_var
<chr> <chr> <dbl> <chr> <dbl> <lgl>
1 01-701-1015 Height 147. <160 2 FALSE
2 01-701-1023 Height 163. >=160 1 TRUE
3 01-701-1028 Height 178. >=160 1 TRUE
4 01-701-1033 Height 175. >=160 1 TRUE
5 01-701-1034 Height NA <NA> NA NA
6 01-701-1047 Height NA <NA> NA NA
7 01-701-1097 Height 169. >=160 1 TRUE
8 01-701-1111 Height 158. <160 2 FALSE
9 01-701-1115 Height 182. >=160 1 TRUE
10 01-701-1118 Height 180. >=160 1 TRUE
11 01-701-1015 Weight 54.0 <NA> NA NA
12 01-701-1023 Weight 78.5 <NA> NA NA
13 01-701-1028 Weight 98.9 <NA> NA NA
14 01-701-1033 Weight 88.4 <NA> NA NA
15 01-701-1034 Weight NA <NA> NA NA
16 01-701-1047 Weight NA <NA> NA NA
17 01-701-1097 Weight 78.0 <NA> NA NA
18 01-701-1111 Weight 60.3 <NA> NA NA
19 01-701-1115 Weight 78.7 <NA> NA NA
20 01-701-1118 Weight 71.7 <NA> NA NA

# derive_vars_cat Test 12: definition has wrong shape
# derive_vars_cat Test 13: definition has wrong shape

Failed to convert `definition` to `tibble`. `definition` should be specified similarly to how you would specify a `tibble` using the `tribble()` function so it can be converted to `tibble` using `tribble()`.

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