#2014 - run required tasks for PR

pharmaverse · Jul 28, 2023 · cde8c2e · cde8c2e
1 parent ad99808
commit cde8c2e
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Showing 4 changed files with 8 additions and 7 deletions.
diff --git a/.Rprofile b/.Rprofile
@@ -1,7 +1,7 @@
 # Set renv profile base on R version.
 renv_profile <- paste(R.version$major, substr(R.version$minor, 1, 1), sep = ".")
 if (file.exists("./renv/profile")) {
-   message("Using renv profile from `renv/profile` file.")
+  message("Using renv profile from `renv/profile` file.")
 } else if (renv_profile %in% c("4.1", "4.2", "4.3")) {
   message("Set renv profile to `", renv_profile, "`")
   Sys.setenv("RENV_PROFILE" = renv_profile)
@@ -11,6 +11,6 @@ if (file.exists("./renv/profile")) {
 
 if ((Sys.getenv("GITHUB_ACTIONS") != "") || (Sys.getenv("DOCKER_CONTAINER_CONTEXT") != "")) {
   options(repos = c(CRAN = "https://cran.rstudio.com"))
-  Sys.setenv(RENV_AUTOLOADER_ENABLED=FALSE)
+  Sys.setenv(RENV_AUTOLOADER_ENABLED = FALSE)
 }
 source("renv/activate.R")
diff --git a/R/derive_var_shift.R b/R/derive_var_shift.R
@@ -76,7 +76,6 @@ derive_var_shift <- function(dataset,
                              na_val,
                              missing_value = "NULL",
                              sep_val = " to ") {
-
   ### BEGIN DEPRECATION
   if (!missing(na_val)) {
     deprecate_warn("0.12.0", "derive_var_shift(na_val = )", "derive_var_shift(missing_value = )")

diff --git a/man/derive_var_shift.Rd b/man/derive_var_shift.Rd
diff --git a/tests/testthat/test-derive_var_shift.R b/tests/testthat/test-derive_var_shift.R
@@ -132,7 +132,6 @@ test_that("derive_var_shift Test 4: Shift with user-specified missing_value and
 
 ## Test 5: Test deprecation warning of na_val argument ----
 test_that("derive_var_shift Test 5: Test deprecation warning of na_val argument", {
-
   input <- tibble::tribble(
     ~USUBJID, ~PARAMCD, ~AVAL, ~ABLFL, ~BNRIND, ~ANRIND,
     "P01", "ALB", 33, "Y", "LOW", "LOW",