-
Notifications
You must be signed in to change notification settings - Fork 2
Issues: phac-nml/mikrokondo
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Author
Label
Projects
Milestones
Assignee
Sort
Issues list
--skip_metagenomic_detection should default to true
enhancement
New feature or request
#108
opened Sep 6, 2024 by
mattheww95
Tokenize species tag on output from Mash and Kraken2
enhancement
New feature or request
#100
opened Aug 19, 2024 by
mattheww95
Support for uncompressed and compressed fastq/fasta
bug
Something isn't working
#60
opened Apr 10, 2024 by
apetkau
Add clean up directive to CheckM
enhancement
New feature or request
#53
opened Mar 22, 2024 by
mattheww95
Reduce temporary file usage in the contaminant removal step
enhancement
New feature or request
#24
opened Feb 7, 2024 by
mattheww95
Update Bakta to v1.9.2 to manage skip amrfinder plus bug
bug
Something isn't working
#21
opened Feb 6, 2024 by
mattheww95
Add option to specify SRAs as input
enhancement
New feature or request
#17
opened Dec 8, 2023 by
mattheww95
Down sampling of genomes with uneven coverage should flag be a quality flag
enhancement
New feature or request
#13
opened Nov 22, 2023 by
mattheww95
ProTip!
Type g p on any issue or pull request to go back to the pull request listing page.