install script for windows GUI

python/install_ieeg-recon_gui_windows.sh

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+#!/bin/bash
+
+# Directory where this script is located
+INSTALL_DIR="$(cd "$(dirname "${BASH_SOURCE[0]}")" && pwd)"
+echo "Install directory: ${INSTALL_DIR}"
+
+
+# source conda
+CONDA_PATH=$(dirname $(dirname $(which conda)))
+source "$CONDA_PATH/etc/profile.d/conda.sh"
+
+
+# Create a conda environment with the specified Python version
+echo "Creating iEEG-recon Environment"
+
+conda create -n ieeg_recon python=3.9 -y
+
+# Activate the conda environment
+# source activate ieeg_recon_m1
+conda activate ieeg_recon
+
+# Upgrade pip
+pip install -U pip
+
+# Install the required Python packages
+pip install antspyx
+pip install antspynet
+
+# Install the rest of the python packages
+pip install nipype
+pip install niworkflows
+pip install ipython
+pip install mayavi
+pip install pyqt5
+pip install voxtool
+pip install pydeface
+pip install pillow
+echo "Python Environment installed..."
+echo "Activate the environment with: conda activate ieeg_recon"
+echo "After activation, run the iEEG-recon docker GUI with: python ${INSTALL_DIR}/ieeg_recon_gui_docker.py"