GitHub - pawelab/OrganConditionalFibrosis: Examining fibrosis enhancers across organs and conditions using bulk ATAC and RNA-seq data.

pawelab / OrganConditionalFibrosis Public

Examining fibrosis enhancers across organs and conditions using bulk ATAC and RNA-seq data.

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Name		Name	Last commit message	Last commit date
Latest commit History 47 Commits
.gitignore		.gitignore
Rplots.pdf		Rplots.pdf
build_grn.R		build_grn.R
build_grn.ipynb		build_grn.ipynb
build_grn.qsub		build_grn.qsub
calc_pgscott.py		calc_pgscott.py
common.sh		common.sh
eval_grn.Rmd		eval_grn.Rmd
find_genes_peaks.ipynb		find_genes_peaks.ipynb
grn.html		grn.html
grn_plot_server.py		grn_plot_server.py
investigate_scores.ipynb		investigate_scores.ipynb
plot_utils.py		plot_utils.py
preprocess_data.ipynb		preprocess_data.ipynb
requirements.txt		requirements.txt
visualize_grn.js		visualize_grn.js