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paulflang authored Mar 7, 2023
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Expand Up @@ -26,16 +26,14 @@ The `/versions/v*results_/` directories often contain a `sacess_to_petab.py` scr

## Manuscript figures

Figures for the manuscript *Reusable rule-based cell cycle model explains compartment-resolved dynamics of 16 observables in RPE-1 cells* that show solutions to PEtab problems can be plotted with the following scrips:
Figures for the manuscript *Reusable rule-based cell cycle model explains compartment-resolved dynamics of 16 observables in RPE-1 cells* that show fits of PEtab problems to RPE1 cells can be plotted with the following scrips:

- [Figure 9](/versions/v4.0.0/results_20230307/v4.0.0_manu.png):
- [`/versions/v4.0.0/results_20230307/plot_sacess_400_manu.py`](/versions/v4.0.0/results_20230307/plot_sacess_400_manu.py)
- [Supplementary Figure 10](/versions/v3.0.1/results_20220421/v3.0.1_manu.png):
- [`/versions/v3.0.1/results_20220421/plot_sacess_301_manu.py`](/versions/v3.0.1/results_20220421/plot_sacess_301_manu.py)
- [Supplementary Figure 11](/versions/v3.2.0/results_20220421/v3.2.0_manu.png):
- [`/versions/v3.2.0/results_20220421/plot_sacess_320_manu.py`](/versions/v3.2.0/results_20220421/plot_sacess_320_manu.py)
- [Figure 9](/versions/v4.0.0/results_20230120/v4.0.0_manu.png):
- [`/versions/v4.0.0/results_20230120/plot_sacess_400_manu.py`](/versions/v4.0.0/results_20230120/plot_sacess_400_manu.py)
- [Figure 10](/versions/v4.0.0/results_20230307/v4.0.0_manu.png):
- [`/versions/v4.0.0/results_20230307/plot_sacess_400_manu.py`](/versions/v4.0.0/results_20230307/plot_sacess_400_manu.py)

## Barebones SBML models fitted to RPE1 data

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