Added Mahalanobis distance thresholding #31
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…om/paninski-lab/eks into keypoint-vectorized-multicam-funcs
themattinthehatt
requested changes
Jan 22, 2025
eks/core.py
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| def inflate_variance(v, maha_results, threshold=5.0, scalar=2.0): |
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move to multicam_smoother.py - it's only used there right?
eks/multicam_smoother.py
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| @@ -53,7 +56,7 @@ def fit_eks_mirrored_multicam( | |||
| bodypart_list (list): List of body parts used. | |||
| """ | |||
| # Load and format input files | |||
| input_dfs_list, keypoint_names = format_data(input_source) | |||
| input_dfs_list, _, keypoint_names = format_data(input_source) | |||
scripts/mirrored_multicam_example.py
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| @@ -35,7 +37,8 @@ | |||
| s_frames=s_frames, | |||
| camera_names=camera_names, | |||
| quantile_keep_pca=quantile_keep_pca, | |||
| verbose=verbose | |||
| verbose=verbose, | |||
| maha=maha | |||
scripts/multicam_example.py
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| @@ -25,6 +25,7 @@ | |||
| camera_names = args.camera_names | |||
| quantile_keep_pca = args.quantile_keep_pca | |||
| verbose = True if args.verbose == 'True' else False | |||
| maha = True if args.maha == 'True' else False | |||
themattinthehatt
requested changes
Jan 27, 2025
themattinthehatt
approved these changes
Jan 27, 2025
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