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    14 repositories

    • common-data-elements

      Public
      Common Data Elements for the RADx-rad COVID-19 Datasets
      data-dictionarycommon-data-elementsradxcovid-19radx-rad
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•1•0•0•Updated Feb 7, 2025Feb 7, 2025

    • radx-harmonizer

      Public
      Scripts to check and harmonize RADx-rad data submissions
      Jupyter Notebook
      •0•0•0•0•Updated Jan 18, 2025Jan 18, 2025

    • metadata

      Public
      Metadata template files for NIH RADx Data Hub
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Oct 25, 2024Oct 25, 2024

    • radx-destiller

      Public
      radx-destiller summarizes key results from publications generated by the NIH RADx-rad initiative.
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Jul 31, 2024Jul 31, 2024

    • radx-kg

      Public
      Knowledge Graph of Digital Assets from the NIH Rapid Acceleration of Diagnostics (RADx) initiative.
      knowledge-graphdatasetsradxcovid-19covid-19-datacovid-testingradx-radradx-techradx-dhtradx-up
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•2•0•0•Updated Mar 16, 2024Mar 16, 2024

    • vqa-panels

      Public
      Viral Quality Assurance Panels used by RADx-rad Projects
      BSD 3-Clause "New" or "Revised" License
      •0•1•0•0•Updated Dec 31, 2023Dec 31, 2023

    • oasis_stack

      Public
      JavaScript
      •0•1•0•0•Updated Nov 9, 2023Nov 9, 2023

    • cdx

      Public
      Connected Diagnostics Platform
      Ruby
      •7•1•0•0•Updated Oct 5, 2023Oct 5, 2023

    • dbgap-reporter

      Public
      Jupyter Notebooks to analyze the number of data access requests for dbGaP datasets and publication including RADx datasets.
      fairdatasetsnihdbgapradxcovid-19radx-radradx-techradx-dhtradx-up
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•1•0•0•Updated Sep 18, 2023Sep 18, 2023

    • oasis

      Public
      UCSD Oasis platform
      JavaScript
      •4•2•1•0•Updated Jun 27, 2023Jun 27, 2023

    • docker-base

      Public
      Docker image build for nextstrain/base
      Dockerfile
      •6•1•0•0•Updated Jun 5, 2023Jun 5, 2023

    • data-hub-analyzer

      Public
      Testing RADx-rad Data Hub
      Jupyter Notebook
      •0•1•0•0•Updated Mar 20, 2023Mar 20, 2023

    • oasis_strapistack

      Public
      JavaScript
      •0•1•0•0•Updated Aug 30, 2022Aug 30, 2022

    • search_outbreak

      Public
      Vue
      •0•1•0•0•Updated Dec 6, 2021Dec 6, 2021