Repositories list

• pacea

  Public
  An R package of Pacific ecosystem information to help facilitate an ecosystem approach to fisheries.

  HTML

  •

  Other

  •0•14•26•0•Updated Nov 19, 2024Nov 19, 2024

• gfsynopsis

  Public
  🐟 A reproducible data synopsis report for over 100 species of British Columbia groundfish

  r-packager-statsvisualization+ 1fisheries

  TeX

  •1•14•15•0•Updated Nov 18, 2024Nov 18, 2024

• herringsr

  Public
  📎 🐟 Herring Science Response document

  TeX

  •1•0•14•0•Updated Nov 18, 2024Nov 18, 2024

• gfdata

  Public
  💾 An R package for data extraction of BC groundfish data

  R

  •0•1•15•0•Updated Nov 15, 2024Nov 15, 2024

• rosettafish

  Public
  🎣 An R package for translating fish- and fisheries-related terms

  R

  •15•3•5•0•Updated Nov 14, 2024Nov 14, 2024

• dogfish-inside

  Public
  Stock Assessment for Inside Dogfish Stock in British Columbia

  R

  •0•0•2•0•Updated Nov 13, 2024Nov 13, 2024

• csasdown

  Public
  📖 An R package for creating CSAS reports in PDF or Word format with R Markdown and bookdown

  rlatexpandoc+ 1rmarkdown

  R

  •

  Other

  •17•47•12•1•Updated Nov 13, 2024Nov 13, 2024

• dogfish-trends

  Public
  Coastwide Pacific Spiny Dogfish trends

  ecologyspatiotemporalsdm+ 4gmrfgroundfishsdmtmbdogfish

  R

  •0•0•15•0•Updated Nov 8, 2024Nov 8, 2024

• lingcod-inside

  Public
  Stock Assessment for Inside Lingcod Stock in British Columbia

  R

  •0•0•0•0•Updated Nov 7, 2024Nov 7, 2024

• gfcondition

  Public
  R

  •0•0•0•0•Updated Oct 31, 2024Oct 31, 2024

• arrowtooth

  Public
  https://pbs-assess.github.io/arrowtooth/

  R

  •0•0•1•0•Updated Oct 24, 2024Oct 24, 2024

• gfplot

  Public
  📈 An R package for plotting of BC groundfish data

  R

  •3•2•9•1•Updated Oct 24, 2024Oct 24, 2024

• gfiscamutils

  Public
  🔨 Utilities for https://github.com/pbs-assess/gfiscam models, including loading, plotting, and table-making

  R

  •1•0•3•0•Updated Oct 21, 2024Oct 21, 2024

• dogfish-assess

  Public
  Scheme

  •1•0•17•0•Updated Oct 18, 2024Oct 18, 2024

• pacea-data

  Public
  A data repository for very large data sets that get used by the pacea package

  GNU General Public License v3.0

  •0•0•0•0•Updated Oct 10, 2024Oct 10, 2024

• renewassess

  Public
  Discussion board for stock assessment renewal group

  HTML

  •0•0•4•0•Updated Oct 9, 2024Oct 9, 2024

• sdmTMB

  Public
  🌎 An R package for spatial and spatiotemporal GLMMs with TMB

  spatial-analysisecologyglmm+ 3species-distribution-modellingtmbr

  R

  •27•187•46•3•Updated Oct 3, 2024Oct 3, 2024

• DDRTMB

  Public
  A delay-difference model written in RTMB

  Smarty

  •

  GNU General Public License v3.0

  •0•0•2•0•Updated Sep 25, 2024Sep 25, 2024

• herringfsar

  Public
  Herring stock assessment document

  HTML

  •0•0•2•0•Updated Sep 23, 2024Sep 23, 2024

• herringutils

  Public
  🔧 Utilities for Herring documents based on https://github.com/pbs-assess/gfiscam models

  R

  •0•0•5•0•Updated Sep 9, 2024Sep 9, 2024

• gengamma

  Public
  R

  •0•0•0•0•Updated Sep 5, 2024Sep 5, 2024

• git-course

  Public
  A repository for teaching the fundamentals of GIT

  TeX

  •80•5•1•0•Updated Sep 4, 2024Sep 4, 2024

• stme-book

  Public
  Notes and code working through 'Spatio-Temporal Models for Ecologists'

  R

  •

  GNU General Public License v3.0

  •0•9•0•0•Updated Aug 19, 2024Aug 19, 2024

• gftrends

  Public
  Trends in Pacific Canadian groundfish stock status

  R

  •0•0•8•0•Updated Aug 7, 2024Aug 7, 2024

• sdmTMB-teaching

  Public
  🧑‍🎓 Workshops on the R package sdmTMB

  HTML

  •

  GNU General Public License v3.0

  •5•18•0•0•Updated Jul 31, 2024Jul 31, 2024

• gfcommercial

  Public
  Groundfish Commercial Biosampling Compendium

  TeX

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Jul 12, 2024Jul 12, 2024

• sdmTMBextra

  Public
  🔨 Extra tools for working with sdmTMB models

  TeX

  •1•3•1•0•Updated Jun 18, 2024Jun 18, 2024

• seesaw

  Public
  Diagnosing causes of the 'seesaw' effect in survey indices

  R

  •0•0•1•0•Updated Jun 14, 2024Jun 14, 2024

• petrale

  Public
  R

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Jun 5, 2024Jun 5, 2024

• larkin

  Public
  Fit and forecast from Larkin and Ricker stock-recruitment models

  R

  •

  GNU General Public License v3.0

  •0•2•5•0•Updated Jun 4, 2024Jun 4, 2024