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    84 repositories

    • ot-ui-apps

      Public
      Open Targets Platform web applications
      javascriptgraphqlreactjswebappembl-ebivitejsturborepoeuropean-bioinformatics-institute
      TypeScript
      •
      Apache License 2.0
      •13•7•0•6•Updated Aug 21, 2025Aug 21, 2025

    • orchestration

      Public
      Open Targets pipeline orchestration layer
      Python
      •
      Apache License 2.0
      •1•2•0•4•Updated Aug 21, 2025Aug 21, 2025

    • ot-ai-api

      Public
      Specialised API service that provides AI-driven endpoints to support the Open Targets web application, integrating natural language processing (NLP) and data extraction features
      JavaScript
      •
      Apache License 2.0
      •1•0•0•1•Updated Aug 20, 2025Aug 20, 2025

    • platform-output-support

      Public
      POS is an automatic and unified place to perform a release of OT Platform to the public
      Python
      •3•1•0•2•Updated Aug 20, 2025Aug 20, 2025

    • ot_croissant

      Public
      Exploratory version for OT croissant
      Jupyter Notebook
      •0•0•0•1•Updated Aug 20, 2025Aug 20, 2025

    • pathways-api

      Public
      TypeScript
      •
      Apache License 2.0
      •1•0•0•0•Updated Aug 20, 2025Aug 20, 2025

    • json_schema

      Public
      Open Targets target-disease association schema
      Python
      •
      Apache License 2.0
      •10•11•0•0•Updated Aug 20, 2025Aug 20, 2025

    • platform-api

      Public
      GraphQL and Rest API rewrite of the current Open Targets platform API
      Scala
      •
      Apache License 2.0
      •7•13•0•0•Updated Aug 20, 2025Aug 20, 2025

    • standalone-deployment-platform

      Public
      Standalone Deployment for Open Targets Platform
      Shell
      •
      Apache License 2.0
      •2•6•0•0•Updated Aug 19, 2025Aug 19, 2025

    • pts

      Public
      Open Targets Pipeline Transformation Stage
      Python
      •
      Apache License 2.0
      •0•0•0•1•Updated Aug 19, 2025Aug 19, 2025

    • gentropy

      Public
      Open Targets python framework for post-GWAS analysis
      pythonopen-sourcegwasgeneticspysparkdrug-discovery
      Jupyter Notebook
      •
      Apache License 2.0
      •12•41•0•7•Updated Aug 18, 2025Aug 18, 2025

    • evidence_datasource_parsers

      Public
      script to convert phewascatalog database to JSONs, with ENSGIDs and EFO ids.
      Python
      •
      Apache License 2.0
      •3•8•0•3•Updated Aug 18, 2025Aug 18, 2025

    • platform-etl-backend

      Public
      Scala
      •
      Apache License 2.0
      •8•10•2•0•Updated Aug 18, 2025Aug 18, 2025

    • curation

      Public
      mappings used by the open targets platform to integrate data sources
      Python
      •
      Apache License 2.0
      •1•5•0•0•Updated Aug 15, 2025Aug 15, 2025

    • Gentropy-manuscript

      Public
      Repository to host code supporting the analysis for the `Systematic and scalable analysis of common variation advances drug target discovery`
      Jupyter Notebook
      •
      Apache License 2.0
      •0•0•0•1•Updated Aug 13, 2025Aug 13, 2025

    • gentroutils

      Public
      Utility CLI tools for gentropy orchestration
      Python
      •
      Apache License 2.0
      •0•0•0•1•Updated Aug 12, 2025Aug 12, 2025

    • opentargets.github.io

      Public
      Open Targets corporate website code using Jekyll
      jekyll
      HTML
      •
      Apache License 2.0
      •3•9•0•1•Updated Aug 12, 2025Aug 12, 2025

    • terraform-google-opentargets-platform

      Public
      Terraform module for Open Targets Platform infrastructure definition
      HCL
      •
      Apache License 2.0
      •2•1•0•1•Updated Aug 11, 2025Aug 11, 2025

    • ebi-to-gcp

      Public
      Synchronise EBI LSF locations to Google Cloud Platform
      Shell
      •3•0•0•2•Updated Aug 11, 2025Aug 11, 2025

    • otter

      Public
      Open Targets' Task ExecutoR
      Python
      •
      Apache License 2.0
      •0•1•0•0•Updated Aug 7, 2025Aug 7, 2025

    • platform-docs

      Public
      https://platform-docs.opentargets.org/
      1•1•0•1•Updated Jul 30, 2025Jul 30, 2025

    • clinical_mining

      Public
      Clinical mining extraction (in active development)
      Python
      •
      Apache License 2.0
      •0•1•0•0•Updated Jul 25, 2025Jul 25, 2025

    • ot-literature

      Public
      The improved Open Targets Literature Pipeline
      Python
      •0•0•0•0•Updated Jul 23, 2025Jul 23, 2025

    • timeseries

      Public
      Assess the evolution over time of evidence supporting disease-target associations in the Open Targets Platform.
      timeseriespysparkopentargets
      Python
      •1•2•0•0•Updated Jul 16, 2025Jul 16, 2025

    • vep-image

      Public
      Custom Ensembl VEP image used for the purpose of variantIndex annotation
      Perl
      •
      Apache License 2.0
      •0•0•0•0•Updated Jul 9, 2025Jul 9, 2025

    • issues

      Public
      Issue tracker for the Open Targets Platform
      tracker
      Apache License 2.0
      •2•12•290•0•Updated Jul 8, 2025Jul 8, 2025

    • notebooks

      Public
      Open Targets Platform notebooks
      Jupyter Notebook
      •0•0•0•1•Updated Jul 4, 2025Jul 4, 2025

    • OnToma

      Public
      Map your disease and phenotype terms to the Open Targets platform ontology
      Python
      •
      Apache License 2.0
      •6•21•0•1•Updated Jun 20, 2025Jun 20, 2025

    • ot-snapshot

      Public
      Snapshots for all the components used to generate a release of the Open Targets Platform
      0•0•0•0•Updated Jun 18, 2025Jun 18, 2025

    • pis

      Public
      Open Targets Pipeline Input Stage
      Python
      •
      Apache License 2.0
      •5•5•0•0•Updated Jun 11, 2025Jun 11, 2025