Open Problems in Single-Cell Analysis

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30 packages

common/sync_test_resources
Published Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction

3
common/sync_resources
Published Aug 7, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/common_resources

3
datasets/normalization/prot_clr
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/openproblems

3
datasets/normalization/l1_sqrt
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/openproblems

3
datasets/normalization/log_scran_pooling
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/openproblems

3
datasets/processors/svd
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/openproblems

3
datasets/normalization/atac_tfidf
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/openproblems

3
datasets/normalization/sqrt_cp
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/openproblems

3
perturbation/batch_correction_scgen
Published Aug 3, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference

2
perturbation/batch_correction_seurat
Published Aug 3, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference

2
methods_expression_correction/gene_efficiency_correction
Published Sep 23, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

2
metrics/similarity
Published Sep 23, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing

2
methods/simplemlp_predict
Published Jan 8, 2025 by Open Problems in Single-Cell Analysis in openproblems-bio/task_predict_modality

2
methods/pycistopic
Published Aug 9, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference

1
create_test_data
Published Aug 1, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference

1
methods/multiome
Published Aug 1, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference

1
pycistopic
Published Aug 7, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference

1
control_methods/true_labels
Published Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_dimensionality_reduction

1
metrics/my_metric
Published Jul 8, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

1
hvgs
Published Aug 1, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference

1
perturbation_counts
Published Aug 1, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference

1
reformat_resources_r
Published Jul 19, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference

1
dummy
Published Jul 24, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference

1
methods/my_method
Published Jul 8, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

1
process_dataset/dataset_simulator
Published Jul 15, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_decomposition

1
methods/scenicplus
Published Jul 19, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference

1
common/create_task_readme
Published Aug 7, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/common_resources

1
methods/scglue
Published Jul 24, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference

1
methods/celloracle
Published Aug 1, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference

1
process_datasets/downstream
Published Aug 7, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

1