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- A bioinformatics tool for working with modified bases
- Methylation/modified base calling separated from basecalling.
medaka
Publicpomoxis
Public- Pod5: a high performance file format for nanopore reads.
bonito
Publicsqlpad
Publicfast-ctc-decode
PublicBlitzing Fast CTC Beam Search DecoderClair3
PublicDTR-phage-pipeline
Publicont_fast5_api
Publicpyspoa
Publicdata-rambler
Publiclinux4.9-minit
Publickmer_models
Publicduplex-tools
Publiconesie
Public- Megalodon is a research command line tool to extract high accuracy modified base and sequence variant calls from raw nanopore reads by anchoring the information rich basecalling neural network output to a reference genome/transriptome.
- Tombo is a suite of tools primarily for the identification of modified nucleotides from raw nanopore sequencing data.
lc23-poster-avian-flu
Public