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    15 repositories

    • behaviormate_utils

      Public
      Arduino Code and Debugging Tools for behaviorMate
      C++
      •
      GNU General Public License v3.0
      •0•0•0•1•Updated Feb 11, 2025Feb 11, 2025

    • behaviorMate

      Public
      Java
      •
      GNU General Public License v3.0
      •2•0•2•5•Updated Feb 11, 2025Feb 11, 2025

    • phylogram

      Public
      minimal package for plotting dendritic morphologies
      Jupyter Notebook
      •0•0•0•0•Updated Dec 3, 2024Dec 3, 2024

    • electroporation

      Public
      A repository for electronics and hardware design files for a single-cell electroporation rig.
      GNU General Public License v3.0
      •0•2•0•0•Updated Jul 1, 2024Jul 1, 2024

    • CA3_replay

      Public
      Code pertaining to Liao et al. Nature Neuroscience 2024
      Python
      •1•2•1•0•Updated Jun 8, 2024Jun 8, 2024

    • Hardware

      Public
      Includes AutoDesk Inventor projects used for lab rigs and other miscellaneous CAD files.
      GNU General Public License v3.0
      •0•0•0•0•Updated Mar 20, 2024Mar 20, 2024

    • vrMate

      Public
      A Unity application for rendering visual scenes. This is the companion application to behaviorMate that enables VR contexts..
      C#
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Nov 21, 2023Nov 21, 2023

    • Vancura_Geiller_NatNeuro_2023

      Public
      Data and analysis code for Vancura*, Geiller* et al. Nat. Neurosci. 2023
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Feb 6, 2023Feb 6, 2023

    • Grosmark_NatNeuro_2021

      Public
      Replay analysis code for Grosmark et al. 2021
      replayneuroscience-methods
      MATLAB
      •0•3•0•0•Updated Jul 20, 2022Jul 20, 2022

    • Terada_Nature2021

      Public
      MATLAB
      •0•0•0•0•Updated Sep 26, 2021Sep 26, 2021

    • Sparks_Liao_NatComms2020

      Public
      Python
      •1•1•0•0•Updated Oct 30, 2020Oct 30, 2020

    • Geiller_Vancura_Neuron2020

      Public
      Python
      •1•1•0•0•Updated Aug 25, 2020Aug 25, 2020

    • sima

      Public
      Python package for analysis of dynamic fluorescence microscopy data
      Python
      •
      GNU General Public License v2.0
      •50•100•34•2•Updated Mar 14, 2019Mar 14, 2019

    • Zaremba_NatNeurosci_2017

      Public
      Analysis code for Zaremba et al. Nat. Neurosci. 2017.
      Python
      •
      MIT License
      •5•1•0•0•Updated Oct 15, 2017Oct 15, 2017

    • roibuddy

      Public
      SIMA ROI Editing and Registration Tool
      Python
      •
      GNU General Public License v2.0
      •12•9•12•2•Updated Feb 10, 2017Feb 10, 2017