Repositories list

• drs-server

  Public
  An implementation of the GA4GH DRS (Data Repository Service) API for the HMP project.

  nodejsjavascriptwebservice+ 6jsonbioinformaticsresearchresearch-toolapijson-api

  JavaScript

  •

  MIT License

  •0•1•0•0•Updated Dec 16, 2022Dec 16, 2022

• osdf-schemas

  Public
  The OSDF JSON-Schema files for the HMP project

  webservicejsonresearch+ 4json-schemaresearch-projectresearch-data-repositorybioinfomatics

  Shell

  •

  MIT License

  •3•13•0•0•Updated Aug 26, 2021Aug 26, 2021

• hmp-qc-humann2

  Public
  To QC and perform functional profiling of data from the Human Microbiome Project

  Python

  •

  MIT License

  •0•2•1•0•Updated Mar 10, 2021Mar 10, 2021

• hmp-qc-dada2

  Public
  To QC and infer exact amplicon sequence variants (ASVs) from high throughput 16S amplicon data.

  MIT License

  •0•0•0•0•Updated Oct 23, 2020Oct 23, 2020

• portal-documentation

  Public
  This repository holds the documentation for accessing the HMPDACC Data Portal

  0•1•0•0•Updated Mar 13, 2019Mar 13, 2019

• cutlass

  Public
  An iHMP domain specific API using osdf-python

  pythonbioinformaticsresearch+ 3rest-apiapi-clientresearch-project

  Python

  •

  MIT License

  •6•5•0•1•Updated Mar 4, 2019Mar 4, 2019

• anadama-pride

  Public
  Framework for submitting proteomics data to the PRIDE archive at EBI

  Python

  •

  MIT License

  •0•1•0•0•Updated Jul 25, 2017Jul 25, 2017